Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 AC105749.1-201ENST00000631338 2008 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 MIR1178-201ENST00000408396 91 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 AC015977.1-201ENST00000418887 292 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 AIMP1P2-201ENST00000425294 312 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 GAPDHP58-201ENST00000438477 1006 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 AL360271.2-201ENST00000447710 161 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 AC022431.1-201ENST00000450941 438 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 RPL21P126-201ENST00000470049 478 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 COX7A2P2-201ENST00000505291 250 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 RNU7-175P-201ENST00000515915 61 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 RNA5SP438-201ENST00000516561 112 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 RNA5SP400-201ENST00000517155 111 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 snoU18.1-201ENST00000629629 71 ntBASIC6.54□□□□□ -1.36
VARS2Q5ST30 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AOX3P-204ENST00000491025 2107 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AC008758.3-201ENST00000507003 1829 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARS2Q5ST30 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AP001541.1-201ENST00000623322 1904 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AC024587.1-201ENST00000505925 2157 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 POLR2KP2-201ENST00000438155 177 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 GAPDHP25-201ENST00000447061 1001 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 Y_RNA.685-201ENST00000516532 108 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 MIR3189-201ENST00000578735 73 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 MIR3176-201ENST00000582210 90 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 OR7E18P-201ENST00000592589 702 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AL645944.1-201ENST00000603857 493 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 AC123912.5-201ENST00000605470 343 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 AL136228.1-201ENST00000622221 319 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARS2Q5ST30 AP001642.1-201ENST00000624727 2117 ntBASIC6.53□□□□□ -1.36
VARS2Q5ST30 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARS2Q5ST30 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
VARS2Q5ST30 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARS2Q5ST30 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
VARS2Q5ST30 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 AL096829.1-201ENST00000413677 457 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 ACA64.1-201ENST00000459171 127 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 AC008481.1-201ENST00000463278 396 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 RPS26P39-201ENST00000469206 341 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 AC098583.1-201ENST00000480875 255 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 RN7SL193P-201ENST00000491708 276 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 AC083795.1-201ENST00000491760 320 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 AC067852.3-201ENST00000589177 561 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 AC009314.1-201ENST00000603871 304 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 AL137067.2-201ENST00000621202 131 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 AP001340.1-201ENST00000624405 217 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms