Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RPL31P41-201ENST00000477967 372 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC104435.1-201ENST00000483483 166 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 GZMAP1-201ENST00000503054 631 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC008562.1-201ENST00000521763 330 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC004923.2-201ENST00000529649 369 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC105137.2-201ENST00000569073 466 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AP001330.4-201ENST00000604350 154 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC007619.2-201ENST00000605743 379 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AL365361.1-201ENST00000566942 3481 ntBASIC2.09□□□□□ -2.08
CCDC58Q4VC31 AC097714.1-201ENST00000511272 1647 ntBASIC2.09□□□□□ -2.08
CCDC58Q4VC31 MTCO1P6-201ENST00000481192 1384 ntBASIC2.09□□□□□ -2.08
CCDC58Q4VC31 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC58Q4VC31 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC58Q4VC31 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC58Q4VC31 MTATP6P31-201ENST00000406985 692 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC58Q4VC31 NPM1P11-201ENST00000417106 855 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 UBE2V1P13-201ENST00000436983 439 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 AL358232.1-201ENST00000448030 501 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 AL359385.1-201ENST00000456509 365 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 AC092798.1-201ENST00000458542 409 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 SNORD109B-201ENST00000458961 67 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 SNORD109A-201ENST00000459128 67 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 CAB39P1-201ENST00000502277 460 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 BTF3P12-201ENST00000519620 469 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 OR5AQ1P-201ENST00000527596 927 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC58Q4VC31 MIR4429-201ENST00000580105 73 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 MIR5195-201ENST00000583555 115 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 FAM60CP-201ENST00000591086 664 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC58Q4VC31 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC58Q4VC31 UCA1.1-201ENST00000620952 75 ntBASIC2.08□□□□□ -2.08
CCDC58Q4VC31 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC58Q4VC31 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 MTND5P28-201ENST00000438005 1594 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC069528.2-201ENST00000624849 1991 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 OR56A5-201ENST00000340110 738 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 RNU6-452P-201ENST00000384406 107 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 SNORA46.1-201ENST00000391069 153 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 FCF1P1-201ENST00000432690 571 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC104978.1-201ENST00000449387 391 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 TRBV26-201ENST00000456572 344 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 XKRY-201ENST00000510392 1100 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 RNA5SP320-201ENST00000516263 124 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 SNRPGP16-201ENST00000533275 226 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC106900.2-201ENST00000604994 317 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 ATP1B3P1-201ENST00000605365 821 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC073111.2-201ENST00000605657 1075 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC245100.7-201ENST00000609678 442 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC104446.1-201ENST00000613728 1321 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 AC123912.3-201ENST00000600907 1367 ntBASIC2.07□□□□□ -2.08
CCDC58Q4VC31 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 RNA5SP258-201ENST00000362750 119 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 RNU5D-1-201ENST00000363299 116 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 SNORA3A-201ENST00000364113 130 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 RNU6-31P-201ENST00000384388 108 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 MT-TC-201ENST00000387405 66 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AL445529.1-201ENST00000398713 389 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 FABP12P1-201ENST00000401911 322 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 PRRC2CP1-201ENST00000404428 159 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 OFD1P18Y-201ENST00000420889 959 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AC019097.1-201ENST00000424783 735 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AC007560.1-201ENST00000426912 237 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 MYL8P-204ENST00000431574 518 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms