Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AL365338.1-201ENST00000422282 858 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 CYCSP46-201ENST00000423569 204 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 ATP5HP2-201ENST00000433885 485 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC098826.1-201ENST00000433943 471 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 RPL21P133-201ENST00000443666 476 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 HSFY6P-201ENST00000445573 403 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AL136097.1-201ENST00000456945 913 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 RPL36AP13-201ENST00000457490 317 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 RPL38P1-201ENST00000460914 211 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC112204.1-201ENST00000502591 103 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC091965.2-201ENST00000512324 613 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC108043.1-201ENST00000512696 574 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC117532.1-201ENST00000514638 323 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC008489.1-201ENST00000524271 483 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 MIR5697-201ENST00000578045 78 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AL031985.2-201ENST00000600955 480 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC012065.4-201ENST00000602445 679 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 MIR6130-201ENST00000619419 109 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 Z69908.1-201ENST00000622603 247 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC243312.2-201ENST00000623340 601 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AL159972.1-201ENST00000625150 448 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC025048.6-202ENST00000627667 438 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 NCAPGP1-201ENST00000505112 1814 ntBASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.55□□□□□ -1.84
PCGF3Q3KNV8 AC005832.2-201ENST00000538921 1430 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 Y_RNA.46-201ENST00000362695 102 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 U3.4-201ENST00000363352 213 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 SNORD116-1-201ENST00000384335 95 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 RNY3P10-201ENST00000384764 102 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AL356967.1-201ENST00000406305 431 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 RN7SKP263-201ENST00000411194 309 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 FTH1P1-201ENST00000437933 532 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 TRIM60P18-201ENST00000441518 828 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 USP9YP12-201ENST00000450481 570 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 HMGN2P16-201ENST00000456802 261 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 RPL31P3-201ENST00000458430 332 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AL049830.2-201ENST00000480072 201 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 CBX3P3-201ENST00000508108 532 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AC117522.2-201ENST00000510049 657 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 NPM1P41-201ENST00000512920 831 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 Y_RNA.695-201ENST00000516715 107 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 RNA5SP468-201ENST00000516782 93 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 MED28P6-201ENST00000558776 231 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AC022655.2-201ENST00000577280 318 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 PIGPP4-201ENST00000584447 307 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AL591034.3-201ENST00000605511 685 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 AC004067.1-201ENST00000608733 700 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 ZYXP1-201ENST00000617638 118 ntBASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF3Q3KNV8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 MTND4P4-201ENST00000439033 1366 ntBASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 RNA5SP317-201ENST00000410176 116 ntBASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 RNU4-65P-201ENST00000410473 140 ntBASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 RN7SKP142-201ENST00000411236 328 ntBASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 RNA5SP311-201ENST00000411290 116 ntBASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 HMGN1P24-201ENST00000412282 298 ntBASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.53□□□□□ -1.84
PCGF3Q3KNV8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms