Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC27Q2M243 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC27Q2M243 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC27Q2M243 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC27Q2M243 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC27Q2M243 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC27Q2M243 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC27Q2M243 AC126323.6-202ENST00000568092 3511 ntBASIC5.85□□□□□ -1.47
CCDC27Q2M243 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC27Q2M243 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC27Q2M243 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC27Q2M243 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC27Q2M243 RNU5E-4P-201ENST00000364931 120 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 Y_RNA.367-201ENST00000365544 101 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 MIR3065-201ENST00000390137 79 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 AL109913.1-201ENST00000421173 514 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 AL356387.2-201ENST00000422272 243 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC245028.1-201ENST00000423259 256 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 NEK4P1-201ENST00000433383 879 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 CALM1P1-201ENST00000442082 433 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 MTND3P10-201ENST00000450967 341 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 DHFRP3-201ENST00000455595 559 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC008481.1-201ENST00000463278 396 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC006463.2-201ENST00000473326 348 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC100870.1-201ENST00000522035 505 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AP004371.1-201ENST00000525240 214 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 ARL2BPP2-201ENST00000550907 489 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC125611.2-201ENST00000551907 647 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AL121579.1-201ENST00000555129 305 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AP005205.1-201ENST00000563503 508 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC079587.1-201ENST00000603846 277 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC020634.1-201ENST00000608701 549 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 YWHAEP7-203ENST00000622054 312 ntBASIC5.84□□□□□ -1.47
CCDC27Q2M243 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC27Q2M243 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CCDC27Q2M243 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC27Q2M243 AC116667.1-201ENST00000604855 2072 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 CKAP2P1-201ENST00000555477 2049 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 RNU6-1284P-201ENST00000363701 100 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC27Q2M243 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 RNU6-641P-201ENST00000384006 107 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 RNU6-606P-201ENST00000384721 111 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 RNU6-1158P-201ENST00000391167 107 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 RPS3AP24-201ENST00000407896 734 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 SNRPEP10-201ENST00000420249 274 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 AL138799.3-201ENST00000438968 350 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 SNORA40.12-201ENST00000516329 111 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 RNU6-358P-201ENST00000516564 75 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 HIGD1AP5-201ENST00000529959 259 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 AL390726.5-202ENST00000564800 256 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 AC055876.1-202ENST00000567053 138 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 MIR5096-201ENST00000583713 70 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 MIR4715-201ENST00000584117 79 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 AC022306.2-201ENST00000617563 647 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 SNHG22-203ENST00000617833 660 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 AP005019.3-201ENST00000620418 560 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 MIR3662-201ENST00000637030 95 ntBASIC5.83□□□□□ -1.48
CCDC27Q2M243 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC27Q2M243 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC27Q2M243 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC27Q2M243 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC27Q2M243 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC27Q2M243 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC27Q2M243 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC27Q2M243 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC27Q2M243 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC27Q2M243 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms