Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GABPAQ06546 AL157700.1-201ENST00000561973 1432 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
GABPAQ06546 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GABPAQ06546 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GABPAQ06546 RNU6-216P-201ENST00000363282 104 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 U3.6-201ENST00000363622 211 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 RNU6-560P-201ENST00000364007 108 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 SNORD116.1-201ENST00000365628 92 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
GABPAQ06546 RNU6-636P-201ENST00000384598 107 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 MIR506-201ENST00000384998 124 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
GABPAQ06546 RNU2-37P-201ENST00000410695 177 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.46□□□□□ -1.86
GABPAQ06546 AC245291.1-201ENST00000419501 328 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 RPL31P12-201ENST00000422587 358 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.46□□□□□ -1.86
GABPAQ06546 USP9YP31-201ENST00000431405 881 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AC236972.1-201ENST00000433225 199 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 PTENP1-201ENST00000447117 1215 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 MTCYBP11-201ENST00000447254 1109 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 NPM1P49-201ENST00000448027 714 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AC004924.1-201ENST00000480160 781 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AC114322.1-201ENST00000506771 926 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 HMGB1P28-201ENST00000507778 552 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 OR4P1P-201ENST00000530808 1136 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.46□□□□□ -1.86
GABPAQ06546 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.46□□□□□ -1.86
GABPAQ06546 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.46□□□□□ -1.86
GABPAQ06546 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GABPAQ06546 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.46□□□□□ -1.86
GABPAQ06546 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.46□□□□□ -1.86
GABPAQ06546 AP001269.3-201ENST00000588718 329 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AC015871.2-201ENST00000603605 948 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AC006329.2-201ENST00000611491 394 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AC092650.2-201ENST00000619984 902 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 AC040168.1-201ENST00000623594 991 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 CYP3A51P-201ENST00000633513 256 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 U6.98-201ENST00000637157 84 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 U6.101-201ENST00000637707 76 ntBASIC3.46□□□□□ -1.86
GABPAQ06546 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GABPAQ06546 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
GABPAQ06546 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.46□□□□□ -1.86
GABPAQ06546 NUP58P1-201ENST00000502546 1738 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 SNRPEP3-201ENST00000338402 276 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 RNA5SP383-201ENST00000362934 120 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 RNU6-7-201ENST00000364784 107 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 RNU6-8-201ENST00000365467 107 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 RNU6-1242P-201ENST00000391052 103 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 AL138880.1-201ENST00000405824 642 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 AL583834.1-201ENST00000406943 343 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 AL450338.1-201ENST00000407987 512 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 RNA5SP80-201ENST00000410475 111 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.45□□□□□ -1.86
GABPAQ06546 OR2AS1P-201ENST00000427827 319 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 AL606517.1-201ENST00000446914 387 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.45□□□□□ -1.86
GABPAQ06546 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.45□□□□□ -1.86
GABPAQ06546 snoU13.3-201ENST00000459441 104 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 SNRPGP3-201ENST00000469405 227 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.45□□□□□ -1.86
GABPAQ06546 AC026412.2-201ENST00000512270 1075 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 RNA5SP356-201ENST00000515972 94 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 RNA5SP367-201ENST00000516557 118 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.45□□□□□ -1.86
GABPAQ06546 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GABPAQ06546 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.45□□□□□ -1.86
GABPAQ06546 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GABPAQ06546 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.45□□□□□ -1.86
GABPAQ06546 AC125611.1-201ENST00000549563 229 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.45□□□□□ -1.86
GABPAQ06546 AC034105.3-201ENST00000565294 442 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 DUXAP3-201ENST00000603616 594 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 AL050303.3-201ENST00000613704 284 ntBASIC3.45□□□□□ -1.86
GABPAQ06546 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.45□□□□□ -1.86
GABPAQ06546 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
GABPAQ06546 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
GABPAQ06546 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 MTCO1P23-201ENST00000415223 1526 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.44□□□□□ -1.86
GABPAQ06546 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
GABPAQ06546 RNA5SP258-201ENST00000362750 119 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 RNU6-1249P-201ENST00000363237 111 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 RNU6-629P-201ENST00000384061 103 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 RPL31P1-201ENST00000398116 372 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AL645937.1-202ENST00000421799 937 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 DUTP6-201ENST00000425573 462 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AC006548.1-201ENST00000427470 102 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AC022018.1-201ENST00000430685 241 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 ATP5F1P1-201ENST00000433775 569 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 RPL23AP22-201ENST00000437556 453 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AC112653.1-201ENST00000443851 386 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.44□□□□□ -1.86
GABPAQ06546 MTCO2P25-201ENST00000447065 681 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 RPL39P6-201ENST00000448289 150 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.44□□□□□ -1.86
GABPAQ06546 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms