Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC112653.1-201ENST00000443851 386 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN20P56880 PDSS1P2-201ENST00000449397 678 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN20P56880 Z82190.1-201ENST00000454534 490 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC104308.1-201ENST00000454621 333 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 RPS20P32-201ENST00000456044 356 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN20P56880 SNORD121B-201ENST00000458838 81 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 ARL2BPP4-201ENST00000506854 471 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN20P56880 AC026726.1-201ENST00000512859 601 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 MTCO2P32-201ENST00000514865 403 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN20P56880 AP003497.1-201ENST00000528472 562 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC022878.1-201ENST00000530684 149 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN20P56880 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.54□□□□□ -1.84
CLDN20P56880 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN20P56880 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN20P56880 SETP2-201ENST00000553886 926 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN20P56880 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.54□□□□□ -1.84
CLDN20P56880 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN20P56880 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN20P56880 AC005255.1-201ENST00000593748 216 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN20P56880 AC112191.3-201ENST00000604371 277 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AL109618.2-201ENST00000605527 211 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC138749.5-201ENST00000611461 208 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CLDN20P56880 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN20P56880 uc_338.32-201ENST00000615087 172 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC116165.2-201ENST00000616705 206 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AC002550.2-201ENST00000621246 394 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AL603839.4-201ENST00000624658 1005 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN20P56880 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CLDN20P56880 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN20P56880 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN20P56880 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN20P56880 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN20P56880 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 FRG1BP-201ENST00000278882 761 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 RNU1-64P-201ENST00000365443 163 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLDN20P56880 U3.20-201ENST00000390909 217 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN20P56880 RNU6-712P-201ENST00000410558 100 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 Y_RNA.608-201ENST00000410647 95 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 RNU2-47P-201ENST00000410649 186 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC007899.1-201ENST00000412776 775 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC244098.2-201ENST00000422068 99 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AL589823.1-201ENST00000429577 183 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 KCTD9P3-201ENST00000434597 1169 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 UBE2V1P13-201ENST00000436983 439 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN20P56880 AC083863.1-201ENST00000438811 231 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN20P56880 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLDN20P56880 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN20P56880 RANP8-201ENST00000444720 713 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.53□□□□□ -1.84
CLDN20P56880 AC098824.1-201ENST00000453565 980 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 CFTRP1-201ENST00000456646 183 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 OR9M1P-201ENST00000459641 921 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN20P56880 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 NPM1P41-201ENST00000512920 831 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 RNU6-352P-201ENST00000516908 107 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 PAICSP4-201ENST00000517543 1253 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC087369.1-201ENST00000520775 996 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN20P56880 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN20P56880 AC007424.1-203ENST00000554613 687 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN20P56880 AC034268.2-201ENST00000571784 482 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 BNIP3P8-201ENST00000597863 560 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC011451.2-201ENST00000604303 598 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC103591.3-201ENST00000608684 209 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN20P56880 AC122108.2-201ENST00000611946 526 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC100793.4-201ENST00000613683 429 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AL591424.2-201ENST00000617023 128 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC108479.2-201ENST00000617314 601 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 AL139089.1-201ENST00000620372 975 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 AC079597.1-201ENST00000624306 508 ntBASIC3.53□□□□□ -1.84
CLDN20P56880 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN20P56880 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN20P56880 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN20P56880 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.85
CLDN20P56880 AC092125.1-201ENST00000562568 1995 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms