Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR1302-8-201ENST00000408342 128 ntBASIC3.49□□□□□ -1.85
PDX1P52945 TPMTP3-201ENST00000411928 735 ntBASIC3.49□□□□□ -1.85
PDX1P52945 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.49□□□□□ -1.85
PDX1P52945 DBIP2-201ENST00000419076 262 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AC245054.1-201ENST00000420944 258 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AL445669.1-201ENST00000426743 755 ntBASIC3.49□□□□□ -1.85
PDX1P52945 EZH2P1-201ENST00000431167 291 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 MTCYBP39-201ENST00000437562 491 ntBASIC3.49□□□□□ -1.85
PDX1P52945 ISCA1P2-201ENST00000438679 421 ntBASIC3.49□□□□□ -1.85
PDX1P52945 SDCBPP1-201ENST00000440192 890 ntBASIC3.49□□□□□ -1.85
PDX1P52945 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 AC017015.1-201ENST00000477387 286 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AC092045.1-201ENST00000495716 1231 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.49□□□□□ -1.85
PDX1P52945 AC026784.1-201ENST00000507986 352 ntBASIC3.49□□□□□ -1.85
PDX1P52945 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 AC024589.1-201ENST00000512207 263 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.49□□□□□ -1.85
PDX1P52945 RN7SKP209-201ENST00000516888 304 ntBASIC3.49□□□□□ -1.85
PDX1P52945 RN7SKP57-201ENST00000517248 293 ntBASIC3.49□□□□□ -1.85
PDX1P52945 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.49□□□□□ -1.85
PDX1P52945 OR4R3P-201ENST00000525084 838 ntBASIC3.49□□□□□ -1.85
PDX1P52945 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 OR5AP1P-201ENST00000529730 940 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AC013828.2-201ENST00000532487 235 ntBASIC3.49□□□□□ -1.85
PDX1P52945 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 RFPL1S-203ENST00000539579 330 ntBASIC3.49□□□□□ -1.85
PDX1P52945 CBX3P5-201ENST00000552017 521 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 AC007424.1-203ENST00000554613 687 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AC099489.2-201ENST00000574976 260 ntBASIC3.49□□□□□ -1.85
PDX1P52945 MIR4644-201ENST00000579929 84 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.49□□□□□ -1.85
PDX1P52945 uc_338.32-201ENST00000615087 172 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AL355365.1-201ENST00000616480 294 ntBASIC3.49□□□□□ -1.85
PDX1P52945 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.49□□□□□ -1.85
PDX1P52945 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PDX1P52945 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.49□□□□□ -1.85
PDX1P52945 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.49□□□□□ -1.85
PDX1P52945 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 AL445523.1-201ENST00000451184 1362 ntBASIC3.49□□□□□ -1.85
PDX1P52945 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PDX1P52945 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDX1P52945 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDX1P52945 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDX1P52945 RNU6-28P-201ENST00000362378 107 ntBASIC3.48□□□□□ -1.85
PDX1P52945 Y_RNA.234-201ENST00000364409 97 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.48□□□□□ -1.85
PDX1P52945 MTCO2P5-201ENST00000422621 426 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.48□□□□□ -1.85
PDX1P52945 AC005326.1-201ENST00000429197 123 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.48□□□□□ -1.85
PDX1P52945 EPS15P1-201ENST00000448836 336 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.48□□□□□ -1.85
PDX1P52945 AC006480.1-201ENST00000449887 378 ntBASIC3.48□□□□□ -1.85
PDX1P52945 FAM172BP-201ENST00000487497 1089 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.48□□□□□ -1.85
PDX1P52945 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.48□□□□□ -1.85
PDX1P52945 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.48□□□□□ -1.85
PDX1P52945 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.48□□□□□ -1.85
PDX1P52945 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.48□□□□□ -1.85
PDX1P52945 AC010625.1-201ENST00000511296 403 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.48□□□□□ -1.85
PDX1P52945 RN7SKP83-201ENST00000516512 178 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.48□□□□□ -1.85
PDX1P52945 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDX1P52945 AC023161.2-201ENST00000551218 780 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AP001004.1-201ENST00000582468 324 ntBASIC3.48□□□□□ -1.85
PDX1P52945 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.48□□□□□ -1.85
PDX1P52945 AC012669.1-201ENST00000603209 283 ntBASIC3.48□□□□□ -1.85
PDX1P52945 MTCYBP22-201ENST00000603788 447 ntBASIC3.48□□□□□ -1.85
PDX1P52945 DUXAP11-201ENST00000603858 526 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AC006077.1-201ENST00000604746 343 ntBASIC3.48□□□□□ -1.85
PDX1P52945 IGHV3-29-201ENST00000604817 344 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AC097468.3-201ENST00000607956 456 ntBASIC3.48□□□□□ -1.85
PDX1P52945 MIR8058-201ENST00000615737 89 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AL596245.1-201ENST00000618994 362 ntBASIC3.48□□□□□ -1.85
PDX1P52945 AC091931.1-201ENST00000623488 728 ntBASIC3.48□□□□□ -1.85
PDX1P52945 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDX1P52945 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDX1P52945 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDX1P52945 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDX1P52945 CR383658.2-201ENST00000547576 1525 ntBASIC3.48□□□□□ -1.85
PDX1P52945 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDX1P52945 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
PDX1P52945 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.48□□□□□ -1.85
PDX1P52945 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PDX1P52945 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDX1P52945 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDX1P52945 CR381670.1-201ENST00000624291 1693 ntBASIC3.47□□□□□ -1.85
PDX1P52945 MIR423-201ENST00000362201 94 ntBASIC3.47□□□□□ -1.85
PDX1P52945 Y_RNA.97-201ENST00000363094 102 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms