Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR5684-201ENST00000585074 65 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AL022099.1-201ENST00000604551 712 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AC012443.1-201ENST00000605605 231 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AC239868.4-201ENST00000608318 671 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AC027807.2-201ENST00000616099 408 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 MIR7703-201ENST00000620784 77 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 AC091905.1-201ENST00000624400 311 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
NKX2-1P43699 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-1P43699 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-1P43699 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-1P43699 AC002546.1-201ENST00000588041 2504 ntBASIC3.24□□□□□ -1.89
NKX2-1P43699 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-1P43699 TEX21P-201ENST00000447107 1476 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AP002001.2-201ENST00000529025 1469 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 MTND5P33-201ENST00000571250 1450 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-1P43699 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.23□□□□□ -1.89
NKX2-1P43699 RNU6-50P-201ENST00000362356 103 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 RNA5SP505-201ENST00000364748 108 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NKX2-1P43699 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-1P43699 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NKX2-1P43699 U8.14-201ENST00000390843 143 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 RNU6-754P-201ENST00000391166 107 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-1P43699 OR6C69P-201ENST00000394268 893 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 DEFB108C-201ENST00000400154 252 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 Z98941.1-201ENST00000407764 100 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 RNU6-248P-201ENST00000410720 107 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-1P43699 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 RPL35AP22-201ENST00000436855 335 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 SKP1P1-201ENST00000438081 489 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 MTCYBP1-201ENST00000454315 1119 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 RPL23AP31-201ENST00000456160 467 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 RNA5SP246-201ENST00000458909 119 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AC112204.1-201ENST00000502591 103 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-1P43699 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AC105914.1-201ENST00000511798 226 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.23□□□□□ -1.89
NKX2-1P43699 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NKX2-1P43699 RN7SKP83-201ENST00000516512 178 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 PAICSP4-201ENST00000517543 1253 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 HMGN1P28-201ENST00000521340 364 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 SNRPGP16-201ENST00000533275 226 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-1P43699 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-1P43699 AGGF1P4-201ENST00000568249 801 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC034268.2-201ENST00000571784 482 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC012213.3-201ENST00000577199 777 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 MIR4443-201ENST00000585052 53 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AC234771.5-201ENST00000600161 514 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC020910.2-201ENST00000603635 610 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AL158211.4-201ENST00000606988 584 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC087241.4-201ENST00000612441 480 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 AC010678.1-201ENST00000614118 713 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-1P43699 AL392088.2-201ENST00000637607 285 ntBASIC3.23□□□□□ -1.89
NKX2-1P43699 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-1P43699 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.23□□□□□ -1.89
NKX2-1P43699 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-1P43699 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.22□□□□□ -1.89
NKX2-1P43699 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NKX2-1P43699 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AC009812.4-201ENST00000569134 1805 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NKX2-1P43699 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NKX2-1P43699 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-1P43699 RNU4-65P-201ENST00000410473 140 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AL359704.1-201ENST00000411586 781 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 CRYBB2P1-203ENST00000415709 538 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AC245028.1-201ENST00000423259 256 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NKX2-1P43699 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AP000936.2-201ENST00000447151 681 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AL033528.1-201ENST00000453780 140 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 CEACAMP4-201ENST00000457676 421 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms