Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA4P43681 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA4P43681 Y_RNA.8-201ENST00000362353 102 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RNU6-511P-201ENST00000363496 107 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 Y_RNA.183-201ENST00000363882 113 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 Y_RNA.199-201ENST00000364014 102 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RNA5SP132-201ENST00000364725 118 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RNU6-1127P-201ENST00000384580 107 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RNA5SP339-201ENST00000390987 122 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RNA5SP241-201ENST00000391326 114 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA4P43681 AC096920.1-201ENST00000423991 241 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 UBE2D3P2-201ENST00000424409 445 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RPL23AP4-201ENST00000427757 463 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC091286.1-201ENST00000431233 461 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA4P43681 GAPDHP25-201ENST00000447061 1001 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AL031659.1-201ENST00000447075 539 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 NDUFB4P10-201ENST00000452541 359 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA4P43681 RN7SL177P-201ENST00000476596 299 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC098583.1-201ENST00000480875 255 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RPL17P19-201ENST00000489069 552 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RNU6-202P-201ENST00000515998 96 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 SNORA14.1-201ENST00000516113 141 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 RNU6-941P-201ENST00000516346 108 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA4P43681 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA4P43681 HMGB1P40-201ENST00000525121 540 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 HIGD1AP5-201ENST00000529959 259 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC126177.5-201ENST00000549599 178 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA4P43681 AC024619.4-201ENST00000580924 316 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHRNA4P43681 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA4P43681 AC060771.1-201ENST00000582031 164 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA4P43681 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA4P43681 AL390123.1-201ENST00000603216 237 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC073410.2-201ENST00000603240 332 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC055839.1-201ENST00000634467 498 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AL049767.1-202ENST00000637826 242 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 AC011460.1-201ENST00000636268 1834 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA4P43681 AC026523.2-201ENST00000625039 7739 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 CDC27P2-201ENST00000425026 1922 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA4P43681 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA4P43681 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA4P43681 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CHRNA4P43681 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHRNA4P43681 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA4P43681 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA4P43681 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CHRNA4P43681 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRNA4P43681 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA4P43681 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA4P43681 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA4P43681 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA4P43681 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CHRNA4P43681 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
CHRNA4P43681 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 Y_RNA.304-201ENST00000365011 112 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.37□□□□□ -1.55
CHRNA4P43681 Y_RNA.576-201ENST00000384781 102 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 RNU6-293P-201ENST00000411259 106 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.37□□□□□ -1.55
CHRNA4P43681 RPL7AP49-201ENST00000429522 581 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 AL591438.1-201ENST00000433508 581 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 RPL19P16-201ENST00000433839 588 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 RPL36AP6-201ENST00000435770 321 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 AC108734.1-201ENST00000439549 399 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 NOP56P2-201ENST00000447491 769 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 UBA52P7-201ENST00000486088 380 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 COX6B1P2-201ENST00000489624 230 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 AL136038.1-201ENST00000497246 351 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 RNU2-10P-201ENST00000516375 211 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 RNA5SP373-201ENST00000517271 95 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRNA4P43681 AC024405.2-202ENST00000532731 184 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 DUX4L52-201ENST00000549363 777 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA4P43681 MIR6798-201ENST00000612887 67 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 AL356274.1-201ENST00000617064 410 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 AP000843.1-201ENST00000624880 701 ntBASIC5.37□□□□□ -1.55
CHRNA4P43681 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA4P43681 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA4P43681 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA4P43681 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA4P43681 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA4P43681 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA4P43681 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA4P43681 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA4P43681 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 AL450345.1-202ENST00000605741 3881 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CHRNA4P43681 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms