Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC007899.1-201ENST00000412776 775 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN9P43378 AL591419.1-201ENST00000427423 339 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC091862.1-201ENST00000438016 1100 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPN9P43378 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN9P43378 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN9P43378 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.93□□□□□ -1.78
PTPN9P43378 BTF3P5-201ENST00000457252 467 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 SNORD42A-201ENST00000459584 64 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 RPS4XP10-201ENST00000465034 731 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 NIPA2P2-201ENST00000496376 1083 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC112204.1-201ENST00000502591 103 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN9P43378 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPN9P43378 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPN9P43378 AC022878.1-201ENST00000530684 149 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPN9P43378 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPN9P43378 SETP2-201ENST00000553886 926 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.93□□□□□ -1.78
PTPN9P43378 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN9P43378 AC006960.3-201ENST00000561845 705 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
PTPN9P43378 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPN9P43378 MIR3611-201ENST00000584484 83 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN9P43378 AC091965.4-201ENST00000607691 587 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC010678.1-201ENST00000614118 713 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC027807.2-201ENST00000616099 408 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN9P43378 AC040168.1-201ENST00000623594 991 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC098679.4-201ENST00000624241 654 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AL603839.4-201ENST00000624658 1005 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN9P43378 CRYM-AS1-204ENST00000637983 556 ntBASIC3.93□□□□□ -1.78
PTPN9P43378 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PTPN9P43378 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN9P43378 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN9P43378 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPN9P43378 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN9P43378 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPN9P43378 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN9P43378 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PTPN9P43378 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN9P43378 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN9P43378 SNORA75-201ENST00000384158 137 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 SOD2P1-201ENST00000396543 562 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 Y_RNA.598-201ENST00000410480 95 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 RN7SKP177-201ENST00000410567 355 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN9P43378 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPN9P43378 AC245052.5-201ENST00000416320 649 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPN9P43378 RPL21P109-201ENST00000422213 475 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN9P43378 AC092017.2-201ENST00000427600 362 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.92□□□□□ -1.78
PTPN9P43378 FAM103A2P-201ENST00000444122 354 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPN9P43378 USP9YP12-201ENST00000450481 570 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPN9P43378 AP1S2P1-201ENST00000457344 379 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 UBDP1-202ENST00000457888 382 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 RNU7-170P-201ENST00000459303 61 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 RN7SL93P-201ENST00000463035 293 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 RN7SL132P-201ENST00000478131 296 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AC108043.1-201ENST00000512696 574 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 RNA5SP143-201ENST00000516936 115 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 PAICSP4-201ENST00000517543 1253 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.92□□□□□ -1.78
PTPN9P43378 MTND4LP18-201ENST00000526864 291 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.92□□□□□ -1.78
PTPN9P43378 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPN9P43378 AC012213.3-201ENST00000577199 777 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPN9P43378 AC244505.7-201ENST00000599675 272 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 VN1R85P-201ENST00000601587 426 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AC055876.5-201ENST00000605667 259 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 BRDTP1-201ENST00000605735 677 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.92□□□□□ -1.78
PTPN9P43378 AC104073.3-201ENST00000610942 955 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AC104010.1-201ENST00000616889 150 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AL713922.2-201ENST00000619384 716 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PTPN9P43378 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN9P43378 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPN9P43378 AP004289.2-201ENST00000444413 1457 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 AC024560.2-201ENST00000507981 1497 ntBASIC3.92□□□□□ -1.78
PTPN9P43378 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPN9P43378 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN9P43378 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PTPN9P43378 OTUD4P1-201ENST00000237841 3067 ntBASIC3.91□□□□□ -1.78
PTPN9P43378 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPN9P43378 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
PTPN9P43378 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTPN9P43378 FRG1BP-201ENST00000278882 761 ntBASIC3.91□□□□□ -1.78
PTPN9P43378 MIR423-201ENST00000362201 94 ntBASIC3.91□□□□□ -1.78
PTPN9P43378 RN7SKP280-201ENST00000364196 304 ntBASIC3.91□□□□□ -1.78
PTPN9P43378 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms