Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNA5SP309-201ENST00000516670 106 ntBASIC2.69□□□□□ -1.98
COL18A1P39060 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.69□□□□□ -1.98
COL18A1P39060 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.69□□□□□ -1.98
COL18A1P39060 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.69□□□□□ -1.98
COL18A1P39060 SUMO2P14-201ENST00000604488 293 ntBASIC2.69□□□□□ -1.98
COL18A1P39060 RNA5SP108-201ENST00000605921 117 ntBASIC2.69□□□□□ -1.98
COL18A1P39060 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.69□□□□□ -1.98
COL18A1P39060 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
COL18A1P39060 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL18A1P39060 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL18A1P39060 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL18A1P39060 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL18A1P39060 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL18A1P39060 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.68□□□□□ -1.98
COL18A1P39060 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
COL18A1P39060 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.68□□□□□ -1.98
COL18A1P39060 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.68□□□□□ -1.98
COL18A1P39060 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.68□□□□□ -1.98
COL18A1P39060 FABP5P13-201ENST00000452144 328 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 AL445669.2-201ENST00000454425 421 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 RPS29P11-201ENST00000496507 171 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.68□□□□□ -1.98
COL18A1P39060 AC093770.1-201ENST00000511559 571 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.68□□□□□ -1.98
COL18A1P39060 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
COL18A1P39060 AP000889.2-201ENST00000532684 490 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 PCNAP1-202ENST00000595299 752 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.68□□□□□ -1.98
COL18A1P39060 AC105429.2-201ENST00000610567 517 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 LINC00216-201ENST00000623548 1126 ntBASIC2.68□□□□□ -1.98
COL18A1P39060 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL18A1P39060 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL18A1P39060 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.67□□□□□ -1.98
COL18A1P39060 MIR583-201ENST00000384846 75 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 RN7SKP123-201ENST00000410732 291 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.67□□□□□ -1.98
COL18A1P39060 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.67□□□□□ -1.98
COL18A1P39060 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.67□□□□□ -1.98
COL18A1P39060 RPS26P30-201ENST00000443431 335 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.67□□□□□ -1.98
COL18A1P39060 TVP23BP2-201ENST00000455082 615 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 AP000873.1-201ENST00000463987 400 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 RNU6-760P-201ENST00000516078 97 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.67□□□□□ -1.98
COL18A1P39060 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.67□□□□□ -1.98
COL18A1P39060 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.67□□□□□ -1.98
COL18A1P39060 MIR4255-201ENST00000579351 72 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 AC115085.1-201ENST00000588924 229 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 AP003117.1-201ENST00000602771 554 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 AC007342.9-201ENST00000623877 1385 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL18A1P39060 DCAF13P1-201ENST00000495256 1330 ntBASIC2.67□□□□□ -1.98
COL18A1P39060 HNRNPDP2-201ENST00000406475 478 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 LUZP4P1-201ENST00000415420 344 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL18A1P39060 AC234782.4-201ENST00000417646 1048 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 AL353729.1-201ENST00000425044 720 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 CBWD4P-201ENST00000445695 655 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.66□□□□□ -1.98
COL18A1P39060 AC092185.1-201ENST00000491371 97 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.66□□□□□ -1.98
COL18A1P39060 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.66□□□□□ -1.98
COL18A1P39060 AC108157.1-201ENST00000510511 539 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.66□□□□□ -1.98
COL18A1P39060 LRRC37A5P-203ENST00000580181 585 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 AP001180.3-201ENST00000582221 145 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 RPAP2P1-201ENST00000603626 1168 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.66□□□□□ -1.98
COL18A1P39060 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL18A1P39060 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.66□□□□□ -1.98
COL18A1P39060 AC091953.2-201ENST00000623979 160 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL18A1P39060 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL18A1P39060 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
COL18A1P39060 RNU6-457P-201ENST00000363999 107 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 SNORA40.18-201ENST00000391200 128 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 PRELID3BP11-201ENST00000414230 479 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.66□□□□□ -1.98
COL18A1P39060 AL591719.1-201ENST00000444669 744 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL18A1P39060 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.66□□□□□ -1.98
COL18A1P39060 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.66□□□□□ -1.98
COL18A1P39060 VN1R80P-201ENST00000597126 338 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 AL391813.2-201ENST00000609113 322 ntBASIC2.66□□□□□ -1.98
COL18A1P39060 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.66□□□□□ -1.98
COL18A1P39060 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL18A1P39060 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COL18A1P39060 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COL18A1P39060 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
COL18A1P39060 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.66□□□□□ -1.98
COL18A1P39060 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL18A1P39060 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.65□□□□□ -1.98
COL18A1P39060 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
COL18A1P39060 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL18A1P39060 AL589655.1-201ENST00000405398 482 ntBASIC2.65□□□□□ -1.99
COL18A1P39060 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.65□□□□□ -1.99
COL18A1P39060 AL358453.1-201ENST00000422522 250 ntBASIC2.65□□□□□ -1.99
COL18A1P39060 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms