Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC083875.1-201ENST00000419509 405 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AL365203.2-201ENST00000423444 196 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 MTND5P14-201ENST00000441481 1267 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 EEF1E1P1-201ENST00000446998 430 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN3P26045 MRPS31P2-201ENST00000451581 518 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 U3.44-201ENST00000458938 192 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AL672167.3-201ENST00000465951 960 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN3P26045 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN3P26045 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN3P26045 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN3P26045 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN3P26045 AC093677.1-201ENST00000514414 678 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AL391156.1-201ENST00000554965 554 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN3P26045 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN3P26045 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN3P26045 AL353997.4-201ENST00000586196 166 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AC067852.3-201ENST00000589177 561 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 BBIP1P1-201ENST00000602999 279 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AP001330.4-201ENST00000604350 154 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN3P26045 AC004223.4-201ENST00000612426 332 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 AC039056.2-201ENST00000622261 511 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN3P26045 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN3P26045 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PTPN3P26045 AL136164.4-201ENST00000625013 2135 ntBASIC3.56□□□□□ -1.84
PTPN3P26045 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN3P26045 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN3P26045 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN3P26045 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN3P26045 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN3P26045 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PTPN3P26045 RPL21P132-201ENST00000331267 462 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 RNU6-1155P-201ENST00000363554 107 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN3P26045 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN3P26045 RNU4-72P-201ENST00000410754 173 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN3P26045 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 RPL21P32-201ENST00000419877 477 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 AC018644.1-201ENST00000429934 551 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN3P26045 AC004866.2-201ENST00000438285 481 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 SDCBPP1-201ENST00000440192 890 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL591503.2-201ENST00000442314 1005 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN3P26045 AL133547.1-201ENST00000448546 220 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 FTH1P2-201ENST00000466086 412 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 RN7SL542P-201ENST00000467147 294 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 AC093809.1-201ENST00000509155 340 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AC119751.5-201ENST00000514077 770 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 RNU6-678P-201ENST00000516832 109 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 TRMT10BP1-201ENST00000519377 943 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN3P26045 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN3P26045 CR383656.7-201ENST00000548164 174 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 MTND3P12-201ENST00000559068 328 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 AC090616.2-202ENST00000584248 222 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN3P26045 AL034351.1-201ENST00000605288 668 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL109618.2-201ENST00000605527 211 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL390208.1-201ENST00000605885 644 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL390240.1-201ENST00000612950 384 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL603755.1-201ENST00000619504 163 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL031667.3-201ENST00000620124 655 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL353748.2-201ENST00000622148 471 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN3P26045 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.55□□□□□ -1.84
PTPN3P26045 U6.98-201ENST00000637157 84 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN3P26045 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN3P26045 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN3P26045 AC007256.1-201ENST00000392253 2765 ntBASIC3.55□□□□□ -1.84
PTPN3P26045 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN3P26045 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN3P26045 RNU6-500P-201ENST00000362349 107 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 Y_RNA.18-201ENST00000362461 102 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 RNU6-433P-201ENST00000363216 104 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 RNU6-343P-201ENST00000364709 104 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 SNORA62.3-201ENST00000365110 153 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms