Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFX1P22670 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RFX1P22670 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFX1P22670 MUC2-202ENST00000613187 4845 ntBASIC5.9□□□□□ -1.46
RFX1P22670 RNU6-639P-201ENST00000384074 107 ntBASIC5.9□□□□□ -1.46
RFX1P22670 RNU1-77P-201ENST00000390868 162 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AL133388.1-201ENST00000404509 287 ntBASIC5.9□□□□□ -1.46
RFX1P22670 RNA5SP111-201ENST00000411386 101 ntBASIC5.9□□□□□ -1.46
RFX1P22670 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 PMCHL1-202ENST00000423102 261 ntBASIC5.9□□□□□ -1.46
RFX1P22670 FAR2P4-202ENST00000425399 584 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AL590762.4-201ENST00000425885 253 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 RPS11P1-201ENST00000451072 473 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.9□□□□□ -1.46
RFX1P22670 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.9□□□□□ -1.46
RFX1P22670 PPP1R11P1-201ENST00000486095 376 ntBASIC5.9□□□□□ -1.46
RFX1P22670 RN7SL97P-201ENST00000486780 299 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.9□□□□□ -1.46
RFX1P22670 SCARNA20.4-201ENST00000516969 131 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 AC105031.1-201ENST00000518550 476 ntBASIC5.9□□□□□ -1.46
RFX1P22670 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.9□□□□□ -1.46
RFX1P22670 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 AC022634.1-201ENST00000520765 532 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.9□□□□□ -1.46
RFX1P22670 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.9□□□□□ -1.46
RFX1P22670 MIR4646-201ENST00000580775 63 ntBASIC5.9□□□□□ -1.46
RFX1P22670 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.9□□□□□ -1.46
RFX1P22670 AL158032.1-201ENST00000605401 106 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AC007619.2-201ENST00000605743 379 ntBASIC5.9□□□□□ -1.46
RFX1P22670 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.9□□□□□ -1.46
RFX1P22670 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.9□□□□□ -1.46
RFX1P22670 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFX1P22670 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFX1P22670 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RFX1P22670 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.89□□□□□ -1.47
RFX1P22670 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFX1P22670 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFX1P22670 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RFX1P22670 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFX1P22670 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFX1P22670 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RFX1P22670 RPL23P2-201ENST00000320371 421 ntBASIC5.89□□□□□ -1.47
RFX1P22670 RNU6-715P-201ENST00000365204 103 ntBASIC5.89□□□□□ -1.47
RFX1P22670 SNORA5.1-201ENST00000384275 131 ntBASIC5.89□□□□□ -1.47
RFX1P22670 SNORD3H-201ENST00000384486 214 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AL445189.1-201ENST00000405722 338 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.89□□□□□ -1.47
RFX1P22670 AC079809.1-201ENST00000415468 276 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AL139095.3-201ENST00000419672 1203 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AL669831.1-202ENST00000428504 417 ntBASIC5.89□□□□□ -1.47
RFX1P22670 RPL7AP49-201ENST00000429522 581 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AL591438.1-201ENST00000433508 581 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AL137792.2-201ENST00000443484 235 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX1P22670 CR383656.1-201ENST00000484916 377 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AC098976.1-201ENST00000513014 541 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.89□□□□□ -1.47
RFX1P22670 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX1P22670 CYCSP27-201ENST00000527643 293 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX1P22670 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX1P22670 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.89□□□□□ -1.47
RFX1P22670 MIR4436B2-201ENST00000581415 91 ntBASIC5.89□□□□□ -1.47
RFX1P22670 MIR4436B1-201ENST00000583272 91 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.89□□□□□ -1.47
RFX1P22670 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX1P22670 AL162431.4-201ENST00000604674 411 ntBASIC5.89□□□□□ -1.47
RFX1P22670 ATP1B3P1-201ENST00000605365 821 ntBASIC5.89□□□□□ -1.47
RFX1P22670 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.89□□□□□ -1.47
RFX1P22670 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.89□□□□□ -1.47
RFX1P22670 AL118522.2-201ENST00000616045 615 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AC109583.2-201ENST00000617367 129 ntBASIC5.89□□□□□ -1.47
RFX1P22670 AL353748.2-201ENST00000622148 471 ntBASIC5.89□□□□□ -1.47
RFX1P22670 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFX1P22670 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.89□□□□□ -1.47
RFX1P22670 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.89□□□□□ -1.47
RFX1P22670 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.89□□□□□ -1.47
RFX1P22670 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFX1P22670 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFX1P22670 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
RFX1P22670 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RFX1P22670 AP001029.2-203ENST00000589795 4910 ntBASIC5.88□□□□□ -1.47
RFX1P22670 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RFX1P22670 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RFX1P22670 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.88□□□□□ -1.47
RFX1P22670 RNA5SP223-201ENST00000365174 120 ntBASIC5.88□□□□□ -1.47
RFX1P22670 Y_RNA.459-201ENST00000384251 102 ntBASIC5.88□□□□□ -1.47
RFX1P22670 RNA5SP241-201ENST00000391326 114 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms