Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL358232.1-201ENST00000448030 501 ntBASIC3.52□□□□□ -1.85
CDH3P22223 ARPC3P5-201ENST00000448802 534 ntBASIC3.52□□□□□ -1.85
CDH3P22223 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.52□□□□□ -1.85
CDH3P22223 RPS24P6-201ENST00000452670 400 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AC099563.1-201ENST00000456086 418 ntBASIC3.52□□□□□ -1.85
CDH3P22223 snoU13.3-201ENST00000459441 104 ntBASIC3.52□□□□□ -1.85
CDH3P22223 MEMO1P3-201ENST00000459811 302 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AC106707.2-201ENST00000484182 374 ntBASIC3.52□□□□□ -1.85
CDH3P22223 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH3P22223 HMGB1P22-201ENST00000505315 124 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH3P22223 RNU1-61P-201ENST00000516107 151 ntBASIC3.52□□□□□ -1.85
CDH3P22223 RNU6-759P-201ENST00000516740 103 ntBASIC3.52□□□□□ -1.85
CDH3P22223 RN7SKP209-201ENST00000516888 304 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH3P22223 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH3P22223 AC107954.1-201ENST00000565906 727 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH3P22223 AL109653.1-201ENST00000603091 248 ntBASIC3.52□□□□□ -1.85
CDH3P22223 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AC080013.4-201ENST00000607624 649 ntBASIC3.52□□□□□ -1.85
CDH3P22223 VIS1.1-201ENST00000610517 203 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AC099778.2-201ENST00000610904 211 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AC004223.4-201ENST00000612426 332 ntBASIC3.52□□□□□ -1.85
CDH3P22223 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AL603755.1-201ENST00000619504 163 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AL031667.3-201ENST00000620124 655 ntBASIC3.52□□□□□ -1.85
CDH3P22223 CU459211.1-201ENST00000635667 749 ntBASIC3.52□□□□□ -1.85
CDH3P22223 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CDH3P22223 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CDH3P22223 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 AL022578.1-201ENST00000439330 1433 ntBASIC3.52□□□□□ -1.85
CDH3P22223 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH3P22223 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.52□□□□□ -1.85
CDH3P22223 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDH3P22223 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH3P22223 AC110774.1-201ENST00000623567 2018 ntBASIC3.51□□□□□ -1.85
CDH3P22223 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDH3P22223 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH3P22223 AC087359.1-201ENST00000508335 1740 ntBASIC3.51□□□□□ -1.85
CDH3P22223 RPL21P132-201ENST00000331267 462 ntBASIC3.51□□□□□ -1.85
CDH3P22223 RNU6-50P-201ENST00000362356 103 ntBASIC3.51□□□□□ -1.85
CDH3P22223 DEFB109C-201ENST00000382575 264 ntBASIC3.51□□□□□ -1.85
CDH3P22223 DEFB109B-201ENST00000382656 264 ntBASIC3.51□□□□□ -1.85
CDH3P22223 RNU5A-2P-201ENST00000384337 116 ntBASIC3.51□□□□□ -1.85
CDH3P22223 MIR7-3-201ENST00000384898 110 ntBASIC3.51□□□□□ -1.85
CDH3P22223 MIR218-2-201ENST00000385006 110 ntBASIC3.51□□□□□ -1.85
CDH3P22223 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH3P22223 RNA5SP129-201ENST00000410276 118 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC245054.1-201ENST00000420944 258 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH3P22223 AL451062.2-201ENST00000427515 271 ntBASIC3.51□□□□□ -1.85
CDH3P22223 PSMA6P3-201ENST00000428242 164 ntBASIC3.51□□□□□ -1.85
CDH3P22223 YME1L1P1-201ENST00000429435 297 ntBASIC3.51□□□□□ -1.85
CDH3P22223 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.51□□□□□ -1.85
CDH3P22223 HIGD1AP11-201ENST00000438361 280 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AL117351.1-201ENST00000438864 766 ntBASIC3.51□□□□□ -1.85
CDH3P22223 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH3P22223 PDSS1P2-201ENST00000449397 678 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AL445669.2-201ENST00000454425 421 ntBASIC3.51□□□□□ -1.85
CDH3P22223 SNORD105B-201ENST00000458770 79 ntBASIC3.51□□□□□ -1.85
CDH3P22223 RPS27P29-201ENST00000463110 252 ntBASIC3.51□□□□□ -1.85
CDH3P22223 RPL31P50-201ENST00000471002 296 ntBASIC3.51□□□□□ -1.85
CDH3P22223 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH3P22223 RPS4XP22-201ENST00000480755 780 ntBASIC3.51□□□□□ -1.85
CDH3P22223 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH3P22223 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.51□□□□□ -1.85
CDH3P22223 AC006499.5-201ENST00000505037 514 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC112198.1-201ENST00000505369 1220 ntBASIC3.51□□□□□ -1.85
CDH3P22223 TXNP6-201ENST00000510190 310 ntBASIC3.51□□□□□ -1.85
CDH3P22223 MTND1P22-201ENST00000510572 951 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH3P22223 RN7SKP13-201ENST00000515933 244 ntBASIC3.51□□□□□ -1.85
CDH3P22223 RNA5SP468-201ENST00000516782 93 ntBASIC3.51□□□□□ -1.85
CDH3P22223 RN7SKP116-201ENST00000516902 319 ntBASIC3.51□□□□□ -1.85
CDH3P22223 RNU6-232P-201ENST00000517144 64 ntBASIC3.51□□□□□ -1.85
CDH3P22223 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CDH3P22223 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH3P22223 AC087373.1-201ENST00000524920 491 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC239860.2-201ENST00000525886 270 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH3P22223 AC011602.1-201ENST00000546484 331 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH3P22223 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH3P22223 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH3P22223 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH3P22223 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH3P22223 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH3P22223 AC053481.3-201ENST00000577881 843 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC008088.1-201ENST00000580993 280 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH3P22223 AC004987.4-201ENST00000603383 338 ntBASIC3.51□□□□□ -1.85
CDH3P22223 U3.45-201ENST00000607547 219 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC004009.2-201ENST00000623016 728 ntBASIC3.51□□□□□ -1.85
CDH3P22223 AC078883.4-201ENST00000623218 367 ntBASIC3.51□□□□□ -1.85
CDH3P22223 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CDH3P22223 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms