Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KLHL2P1-201ENST00000508691 521 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 ENPP7P9-201ENST00000514456 627 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 RNU6-875P-201ENST00000516488 106 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.62□□□□□ -1.51
ERCC3P19447 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.62□□□□□ -1.51
ERCC3P19447 AC100870.1-201ENST00000522035 505 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ERCC3P19447 OR4H12P-201ENST00000556269 907 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.62□□□□□ -1.51
ERCC3P19447 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 AC093913.1-201ENST00000614178 329 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 AL359314.1-201ENST00000616913 261 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 AC006504.8-201ENST00000621046 635 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 ASNSP3-201ENST00000451989 1306 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.62□□□□□ -1.51
ERCC3P19447 OR51H2P-202ENST00000641424 3046 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ERCC3P19447 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 MTND5P17-201ENST00000418405 1603 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 OR4G1P-203ENST00000641984 1631 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 AL645937.1-201ENST00000641739 1652 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.62□□□□□ -1.51
ERCC3P19447 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 BDP1P-201ENST00000582658 1990 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ERCC3P19447 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ERCC3P19447 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ERCC3P19447 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.62□□□□□ -1.51
ERCC3P19447 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 AL136964.1-201ENST00000622038 2990 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC3P19447 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.61□□□□□ -1.51
ERCC3P19447 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 SNORA32.2-201ENST00000384049 122 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 SNORA24.1-201ENST00000384401 135 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 U3.30-201ENST00000391308 210 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AC110754.1-201ENST00000399740 601 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AL357515.1-201ENST00000402967 542 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AL136116.1-201ENST00000403591 381 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AL606923.1-201ENST00000406616 190 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 EEF1A1P40-201ENST00000412883 573 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AC114755.2-201ENST00000413520 361 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC3P19447 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC3P19447 AC018630.2-202ENST00000422992 927 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AC024082.2-201ENST00000434771 238 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 MTND4P14-201ENST00000435799 1354 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC3P19447 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.61□□□□□ -1.51
ERCC3P19447 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 HMGN1P12-201ENST00000499125 195 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC3P19447 SNORA31.20-201ENST00000517111 133 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC3P19447 SUB1P1-201ENST00000524415 382 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC3P19447 OR5BN1P-201ENST00000532955 829 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC3P19447 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC3P19447 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC3P19447 AC040958.1-201ENST00000561102 201 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC3P19447 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.61□□□□□ -1.51
ERCC3P19447 AL158032.1-201ENST00000605401 106 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC3P19447 AC015967.1-201ENST00000619893 476 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AC010338.1-201ENST00000621823 717 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 AC067931.1-201ENST00000624190 671 ntBASIC5.61□□□□□ -1.51
ERCC3P19447 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.61□□□□□ -1.51
ERCC3P19447 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC3P19447 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ERCC3P19447 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 AC004925.1-201ENST00000624256 2706 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 RNU6-1287P-201ENST00000362914 107 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 RNU6-173P-201ENST00000364215 104 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AC068538.1-201ENST00000376856 336 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 RNU6-1060P-201ENST00000384664 107 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms