Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 Y_RNA.114-201ENST00000363265 113 ntBASIC7.12□□□□□ -1.27
CD44P16070 SNORD35A-201ENST00000363389 86 ntBASIC7.12□□□□□ -1.27
CD44P16070 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 MIR10B-201ENST00000385011 110 ntBASIC7.12□□□□□ -1.27
CD44P16070 AL592291.1-201ENST00000403830 352 ntBASIC7.12□□□□□ -1.27
CD44P16070 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.12□□□□□ -1.27
CD44P16070 SCARNA11.1-201ENST00000516918 132 ntBASIC7.12□□□□□ -1.27
CD44P16070 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.12□□□□□ -1.27
CD44P16070 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC7.12□□□□□ -1.27
CD44P16070 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC7.12□□□□□ -1.27
CD44P16070 AC010287.1-201ENST00000566916 357 ntBASIC7.12□□□□□ -1.27
CD44P16070 AC036176.3-201ENST00000602456 418 ntBASIC7.12□□□□□ -1.27
CD44P16070 MIR6737-201ENST00000617385 70 ntBASIC7.12□□□□□ -1.27
CD44P16070 AC090617.7-201ENST00000623952 126 ntBASIC7.12□□□□□ -1.27
CD44P16070 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.12□□□□□ -1.27
CD44P16070 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.12□□□□□ -1.27
CD44P16070 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
CD44P16070 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 AL136164.4-201ENST00000625013 2135 ntBASIC7.12□□□□□ -1.27
CD44P16070 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC7.12□□□□□ -1.27
CD44P16070 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CD44P16070 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CD44P16070 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.11□□□□□ -1.27
CD44P16070 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CD44P16070 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.11□□□□□ -1.27
CD44P16070 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.11□□□□□ -1.27
CD44P16070 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 RNA5SP308-201ENST00000362532 115 ntBASIC7.11□□□□□ -1.27
CD44P16070 SNORD8-201ENST00000363915 110 ntBASIC7.11□□□□□ -1.27
CD44P16070 RNU6-1243P-201ENST00000364028 107 ntBASIC7.11□□□□□ -1.27
CD44P16070 RNU6-1107P-201ENST00000364817 104 ntBASIC7.11□□□□□ -1.27
CD44P16070 Y_RNA.572-201ENST00000384757 98 ntBASIC7.11□□□□□ -1.27
CD44P16070 RNU6ATAC19P-201ENST00000408096 110 ntBASIC7.11□□□□□ -1.27
CD44P16070 AL133482.1-201ENST00000415988 498 ntBASIC7.11□□□□□ -1.27
CD44P16070 Z82209.1-201ENST00000422141 2135 ntBASIC7.11□□□□□ -1.27
CD44P16070 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.11□□□□□ -1.27
CD44P16070 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.11□□□□□ -1.27
CD44P16070 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC7.11□□□□□ -1.27
CD44P16070 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC7.11□□□□□ -1.27
CD44P16070 RN7SKP43-201ENST00000516173 320 ntBASIC7.11□□□□□ -1.27
CD44P16070 AC090142.3-201ENST00000519012 385 ntBASIC7.11□□□□□ -1.27
CD44P16070 IGHV1-14-201ENST00000523391 241 ntBASIC7.11□□□□□ -1.27
CD44P16070 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.11□□□□□ -1.27
CD44P16070 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CD44P16070 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.11□□□□□ -1.27
CD44P16070 MIR4782-201ENST00000577987 79 ntBASIC7.11□□□□□ -1.27
CD44P16070 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.11□□□□□ -1.27
CD44P16070 AL590392.1-201ENST00000604960 446 ntBASIC7.11□□□□□ -1.27
CD44P16070 AC083809.1-201ENST00000615051 472 ntBASIC7.11□□□□□ -1.27
CD44P16070 AL078604.3-201ENST00000615580 211 ntBASIC7.11□□□□□ -1.27
CD44P16070 AC007998.4-201ENST00000612496 2533 ntBASIC7.11□□□□□ -1.27
CD44P16070 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CD44P16070 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
CD44P16070 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.1□□□□□ -1.27
CD44P16070 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CD44P16070 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC7.1□□□□□ -1.27
CD44P16070 AC010894.1-201ENST00000313760 361 ntBASIC7.1□□□□□ -1.27
CD44P16070 Y_RNA.220-201ENST00000364244 109 ntBASIC7.1□□□□□ -1.27
CD44P16070 Y_RNA.281-201ENST00000364774 94 ntBASIC7.1□□□□□ -1.27
CD44P16070 RN7SKP292-201ENST00000365522 317 ntBASIC7.1□□□□□ -1.27
CD44P16070 SNORA70H-201ENST00000383910 135 ntBASIC7.1□□□□□ -1.27
CD44P16070 SNORA70J-201ENST00000384182 135 ntBASIC7.1□□□□□ -1.27
CD44P16070 MIR1255A-201ENST00000408338 113 ntBASIC7.1□□□□□ -1.27
CD44P16070 AC073261.1-201ENST00000429409 121 ntBASIC7.1□□□□□ -1.27
CD44P16070 RPL7AP61-201ENST00000443410 636 ntBASIC7.1□□□□□ -1.27
CD44P16070 EEF1A1P1-201ENST00000447052 739 ntBASIC7.1□□□□□ -1.27
CD44P16070 AC009244.1-201ENST00000450566 258 ntBASIC7.1□□□□□ -1.27
CD44P16070 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.1□□□□□ -1.27
CD44P16070 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.1□□□□□ -1.27
CD44P16070 APOOP4-201ENST00000513530 597 ntBASIC7.1□□□□□ -1.27
CD44P16070 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.1□□□□□ -1.27
CD44P16070 IGKV1D-22-201ENST00000518953 324 ntBASIC7.1□□□□□ -1.27
CD44P16070 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC7.1□□□□□ -1.27
CD44P16070 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.1□□□□□ -1.27
CD44P16070 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.1□□□□□ -1.27
CD44P16070 CYP4A27P-201ENST00000567218 190 ntBASIC7.1□□□□□ -1.27
CD44P16070 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.1□□□□□ -1.27
CD44P16070 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.1□□□□□ -1.27
CD44P16070 AL391903.3-201ENST00000612158 163 ntBASIC7.1□□□□□ -1.27
CD44P16070 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC7.1□□□□□ -1.27
CD44P16070 AL445567.2-201ENST00000618935 498 ntBASIC7.1□□□□□ -1.27
CD44P16070 AC068700.1-201ENST00000565862 3754 ntBASIC7.1□□□□□ -1.27
CD44P16070 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CD44P16070 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.1□□□□□ -1.27
CD44P16070 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms