Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RN7SKP219-201ENST00000516825 296 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 NARSP2-201ENST00000518524 679 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.07□□□□□ -1.6
ITGA4P13612 AP001781.1-201ENST00000530977 207 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 AP003072.1-201ENST00000531740 145 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 AP000857.1-201ENST00000532151 543 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ITGA4P13612 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 MIR4277-201ENST00000578298 84 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 RNU6-89P-201ENST00000606519 100 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 Y_RNA.812-201ENST00000610788 101 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 Y_RNA.784-201ENST00000613803 101 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 Y_RNA.787-201ENST00000616522 101 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 Y_RNA.780-201ENST00000617336 101 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 Y_RNA.801-201ENST00000619005 101 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.07□□□□□ -1.6
ITGA4P13612 MIR6758-201ENST00000620653 63 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.07□□□□□ -1.6
ITGA4P13612 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.07□□□□□ -1.6
ITGA4P13612 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.07□□□□□ -1.6
ITGA4P13612 OR56B2P-202ENST00000641377 2453 ntBASIC5.07□□□□□ -1.6
ITGA4P13612 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ITGA4P13612 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ITGA4P13612 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.07□□□□□ -1.6
ITGA4P13612 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.07□□□□□ -1.6
ITGA4P13612 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ITGA4P13612 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ITGA4P13612 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ITGA4P13612 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ITGA4P13612 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ITGA4P13612 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ITGA4P13612 HSPE1P11-201ENST00000339579 310 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 RNU6-511P-201ENST00000363496 107 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 Y_RNA.162-201ENST00000363683 102 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 Y_RNA.326-201ENST00000365176 113 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 RNU6-641P-201ENST00000384006 107 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 RNU6-146P-201ENST00000384602 108 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 RPL12P34-201ENST00000424532 479 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 RPEP3-201ENST00000425462 676 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 RNU7-59P-201ENST00000459101 61 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AC007547.1-201ENST00000462177 490 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AC053481.1-201ENST00000467217 306 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AC025164.1-201ENST00000496249 478 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AC005798.1-201ENST00000513715 387 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AC017037.2-201ENST00000513850 890 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 RN7SKP277-201ENST00000516895 283 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 HMGB1P41-201ENST00000520234 440 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.06□□□□□ -1.6
ITGA4P13612 OR5B10P-201ENST00000532869 642 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AL133271.1-201ENST00000538229 291 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 PSMA3P-201ENST00000555485 635 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.06□□□□□ -1.6
ITGA4P13612 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.06□□□□□ -1.6
ITGA4P13612 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.06□□□□□ -1.6
ITGA4P13612 MIR4697-201ENST00000582977 78 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AC020910.2-201ENST00000603635 610 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AL133255.1-201ENST00000606374 441 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.06□□□□□ -1.6
ITGA4P13612 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.06□□□□□ -1.6
ITGA4P13612 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.06□□□□□ -1.6
ITGA4P13612 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ITGA4P13612 OR14L1P-202ENST00000641545 3009 ntBASIC5.06□□□□□ -1.6
ITGA4P13612 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ITGA4P13612 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ITGA4P13612 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ITGA4P13612 AC004972.1-201ENST00000623934 2209 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ITGA4P13612 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ITGA4P13612 AC027228.2-201ENST00000567141 2154 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.05□□□□□ -1.6
ITGA4P13612 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
ITGA4P13612 AC108751.5-201ENST00000492880 1336 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ITGA4P13612 RPL32P3-201ENST00000359025 275 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 Y_RNA.431-201ENST00000384086 102 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 U3.22-201ENST00000391120 215 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 RN7SKP140-201ENST00000411196 284 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 USP9YP20-201ENST00000419224 558 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.05□□□□□ -1.6
ITGA4P13612 NCOR1P3-201ENST00000420479 303 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 OR2AS1P-201ENST00000427827 319 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 SAR1AP4-201ENST00000429225 591 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.05□□□□□ -1.6
ITGA4P13612 AC024082.2-201ENST00000434771 238 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 HMGB1P18-201ENST00000438801 619 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 RPS26P2-201ENST00000440331 348 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 HMGB3P9-201ENST00000441799 583 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 MRPL48P1-201ENST00000445390 636 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.05□□□□□ -1.6
ITGA4P13612 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 RNU6-329P-201ENST00000459618 107 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 RPL7L1P8-201ENST00000469911 741 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 AC126389.1-201ENST00000477436 290 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.05□□□□□ -1.6
ITGA4P13612 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ITGA4P13612 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.05□□□□□ -1.6
ITGA4P13612 AC007016.1-201ENST00000512110 244 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 RNU7-51P-201ENST00000516560 62 ntBASIC5.05□□□□□ -1.6
ITGA4P13612 IGKV2D-36-201ENST00000518643 226 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms