Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 EIF4EP1-201ENST00000422311 642 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 AC023347.2-201ENST00000433994 462 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 PGBD4P3-201ENST00000440731 581 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.77□□□□□ -1.65
SNRPA1P09661 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.77□□□□□ -1.65
SNRPA1P09661 HMGB3P21-201ENST00000452483 547 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC026410.2-201ENST00000460281 156 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC146507.1-201ENST00000468335 354 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.77□□□□□ -1.65
SNRPA1P09661 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.77□□□□□ -1.65
SNRPA1P09661 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 SNORA59B-202ENST00000578183 701 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC092954.2-201ENST00000609103 430 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 AC103710.1-201ENST00000610003 901 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 AC069234.5-201ENST00000611056 416 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 AC091304.9-201ENST00000612091 226 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC019226.1-201ENST00000625666 515 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNRPA1P09661 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SNRPA1P09661 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 OR11H5P-202ENST00000641612 1325 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AC087190.4-201ENST00000574616 8334 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 ZNF962P-201ENST00000443465 3140 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SNRPA1P09661 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 MIR218-2-201ENST00000385006 110 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 RN7SKP266-201ENST00000410232 287 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 Y_RNA.608-201ENST00000410647 95 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.76□□□□□ -1.65
SNRPA1P09661 AC233728.2-201ENST00000425348 757 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 BX890604.2-201ENST00000427883 474 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AP000907.1-201ENST00000428428 510 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.76□□□□□ -1.65
SNRPA1P09661 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.76□□□□□ -1.65
SNRPA1P09661 RPL21P23-201ENST00000446654 460 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 WASF1P1-201ENST00000447560 1131 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.76□□□□□ -1.65
SNRPA1P09661 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 AC092989.1-201ENST00000481235 277 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.76□□□□□ -1.65
SNRPA1P09661 AC022447.3-201ENST00000506865 495 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 PRDX4P1-201ENST00000507189 574 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.76□□□□□ -1.65
SNRPA1P09661 ARL2BPP6-201ENST00000512757 439 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AC018797.3-201ENST00000513388 1241 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AC034159.1-201ENST00000513885 583 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 RN7SKP13-201ENST00000515933 244 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 MTCO2P4-201ENST00000517968 247 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 RANP9-201ENST00000519957 271 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.76□□□□□ -1.65
SNRPA1P09661 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.76□□□□□ -1.65
SNRPA1P09661 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.76□□□□□ -1.65
SNRPA1P09661 HSPE1P3-201ENST00000559254 309 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.76□□□□□ -1.65
SNRPA1P09661 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.76□□□□□ -1.65
SNRPA1P09661 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.76□□□□□ -1.65
SNRPA1P09661 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.76□□□□□ -1.65
SNRPA1P09661 AC243312.2-201ENST00000623340 601 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AC124864.2-201ENST00000624736 186 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 AC110994.2-201ENST00000635481 492 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 FAM157B-203ENST00000639350 358 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SNRPA1P09661 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 MTCO1P12-201ENST00000414273 1543 ntBASIC4.76□□□□□ -1.65
SNRPA1P09661 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNRPA1P09661 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.76□□□□□ -1.65
SNRPA1P09661 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNRPA1P09661 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SNRPA1P09661 MFSD8-236ENST00000641509 4050 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 XPOTP1-201ENST00000443317 2398 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 SNORD9-201ENST00000362566 104 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 RNA5SP391-201ENST00000363456 119 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 Y_RNA.296-201ENST00000364930 108 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 Y_RNA.303-201ENST00000364998 94 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 Y_RNA.372-201ENST00000365599 102 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.75□□□□□ -1.65
SNRPA1P09661 RNU6-1293P-201ENST00000384077 107 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 MIR23A-201ENST00000385245 73 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 MIR513A2-201ENST00000385249 127 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNRPA1P09661 AC016769.3-201ENST00000396562 315 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 ARF4P3-201ENST00000397387 509 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 MIR1305-201ENST00000408300 86 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms