Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC4P09017 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 AC012321.1-201ENST00000561622 1588 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HOXC4P09017 SNORD56.3-201ENST00000363507 71 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 RNU4-68P-201ENST00000364314 141 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 RPL5P18-201ENST00000406671 891 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 HMGB3P23-201ENST00000414981 585 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 TOMM22P1-201ENST00000418578 312 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 RPS3AP37-201ENST00000419176 745 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXC4P09017 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXC4P09017 COTL1P1-201ENST00000422309 375 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AC010099.3-201ENST00000423896 409 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXC4P09017 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 HMGN2P20-201ENST00000437531 273 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 RPS26P30-201ENST00000443431 335 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 HMGB3P6-201ENST00000444896 598 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 GAPDHP27-201ENST00000447427 1020 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXC4P09017 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC4P09017 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 AC091951.3-201ENST00000504093 246 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 HMGB3P15-201ENST00000507326 574 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AC008837.1-201ENST00000511513 412 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 IGKV2D-36-201ENST00000518643 226 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
HOXC4P09017 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 AC023813.2-201ENST00000564321 469 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AC034268.2-201ENST00000571784 482 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXC4P09017 MAGOH2P-202ENST00000584384 429 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AC015688.2-201ENST00000584523 262 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC4P09017 AL353778.1-201ENST00000603149 408 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AL035411.2-201ENST00000604022 421 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AC009237.15-201ENST00000610252 501 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXC4P09017 AC010975.3-201ENST00000618727 978 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 AL158163.2-201ENST00000619110 700 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC4P09017 AL121594.5-201ENST00000631724 573 ntBASIC2.95□□□□□ -1.94
HOXC4P09017 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HOXC4P09017 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXC4P09017 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXC4P09017 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXC4P09017 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HOXC4P09017 SNORA80A-201ENST00000363922 136 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 RNU6-353P-201ENST00000364266 108 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HOXC4P09017 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXC4P09017 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC4P09017 RNU6-224P-201ENST00000384055 107 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 Y_RNA.578-201ENST00000390903 88 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 RPL31P1-201ENST00000398116 372 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 MTCO2P31-201ENST00000402702 684 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 EEF1A1P41-201ENST00000414667 207 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 RPS7P9-201ENST00000414704 586 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC4P09017 TAF13P2-201ENST00000416876 286 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 RPS24P7-201ENST00000416921 246 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXC4P09017 AL513175.2-201ENST00000422071 443 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC4P09017 AL139132.1-201ENST00000431587 344 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXC4P09017 AL050341.1-201ENST00000447743 313 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC4P09017 USP9YP25-201ENST00000457708 443 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 ARPC3P2-201ENST00000457786 533 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AC005410.1-202ENST00000460347 485 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXC4P09017 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC4P09017 SCARNA13-201ENST00000516672 275 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 IGJP1-201ENST00000522682 475 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXC4P09017 OR4A45P-201ENST00000529954 901 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AC124293.1-201ENST00000530034 493 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXC4P09017 SYF2P1-201ENST00000550658 413 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 ZNF321P-202ENST00000550843 495 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AC004217.3-201ENST00000551552 878 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 MRPS36P5-201ENST00000551909 298 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC4P09017 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC4P09017 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HOXC4P09017 AC145350.1-201ENST00000567426 208 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC4P09017 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXC4P09017 AF131215.7-201ENST00000602443 707 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 DUXAP3-201ENST00000603616 594 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 AC025588.2-201ENST00000604851 466 ntBASIC2.94□□□□□ -1.94
HOXC4P09017 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms