Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PPIAP31-201ENST00000405422 495 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 CCNG1P1-201ENST00000406783 885 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 RN7SKP56-201ENST00000410513 331 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 RNU6-516P-201ENST00000411381 104 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-2O95096 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-2O95096 USP9YP13-201ENST00000417797 480 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 BX890604.2-201ENST00000427883 474 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-2O95096 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.58□□□□□ -1.84
NKX2-2O95096 RPL35AP22-201ENST00000436855 335 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-2O95096 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-2O95096 AP000936.2-201ENST00000447151 681 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.58□□□□□ -1.84
NKX2-2O95096 DNAJC19P1-201ENST00000455312 319 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 RNU6-956P-201ENST00000458868 103 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-2O95096 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-2O95096 MIR2116-201ENST00000517221 80 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 RPL12P22-201ENST00000519073 490 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-2O95096 AP000907.2-201ENST00000530827 353 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 AP000873.5-201ENST00000533906 236 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
NKX2-2O95096 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.58□□□□□ -1.84
NKX2-2O95096 AL356432.3-201ENST00000568952 465 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 AC005771.1-201ENST00000585581 349 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 RSL24D1P11-201ENST00000591045 491 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.58□□□□□ -1.84
NKX2-2O95096 RN7SKP299-201ENST00000606679 301 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 ZYXP1-201ENST00000617638 118 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 AC243312.2-201ENST00000623340 601 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-2O95096 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-2O95096 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.58□□□□□ -1.84
NKX2-2O95096 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-2O95096 AC099654.13-201ENST00000639774 207 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-2O95096 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-2O95096 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NKX2-2O95096 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-2O95096 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-2O95096 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-2O95096 AC018529.3-201ENST00000624212 2254 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC007685.1-201ENST00000329806 452 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-2O95096 RNU5E-8P-201ENST00000363502 116 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-2O95096 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-2O95096 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AL603766.1-201ENST00000407763 664 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 RNU2-37P-201ENST00000410695 177 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 RNU2-71P-201ENST00000411395 189 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 HMGN1P14-201ENST00000412459 517 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 BTF3L4P1-201ENST00000413813 468 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX2-2O95096 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 PPP1R11P2-201ENST00000423543 382 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 MTATP6P4-201ENST00000427725 675 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-2O95096 Z74696.2-201ENST00000436514 498 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX2-2O95096 SSXP1-201ENST00000453640 473 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 SNORD42A-201ENST00000459584 64 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC084198.1-201ENST00000477747 402 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 RPS3AP50-201ENST00000487064 803 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 MTND4P2-201ENST00000507767 1203 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
NKX2-2O95096 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 MTCO3P28-201ENST00000513351 515 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC010342.1-201ENST00000514047 877 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 RNU6-798P-201ENST00000516912 103 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AP003467.2-201ENST00000520175 319 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC022616.6-201ENST00000520479 119 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-2O95096 AL133271.1-201ENST00000538229 291 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC125611.2-201ENST00000551907 647 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC007224.1-201ENST00000564410 144 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms