Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC103810.1-201ENST00000579873 453 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.94□□□□□ -2.1
SNRNP200O75643 AL109653.1-201ENST00000603091 248 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC241585.2-209ENST00000638217 143 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC007256.1-201ENST00000392253 2765 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SNRNP200O75643 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNRNP200O75643 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SNRNP200O75643 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 MIR320B1-201ENST00000390209 79 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 SNORA17.3-201ENST00000391159 129 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 U3.37-201ENST00000408528 213 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.93□□□□□ -2.1
SNRNP200O75643 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.93□□□□□ -2.1
SNRNP200O75643 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.93□□□□□ -2.1
SNRNP200O75643 MTND5P4-201ENST00000514978 288 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.93□□□□□ -2.1
SNRNP200O75643 AC117490.2-201ENST00000610042 594 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 VIS1.1-201ENST00000610517 203 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.93□□□□□ -2.1
SNRNP200O75643 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SNRNP200O75643 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SNRNP200O75643 MTND4P35-201ENST00000604257 1375 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 Z82209.1-201ENST00000422141 2135 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 RNU6-1027P-201ENST00000383998 107 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNRNP200O75643 RPL34P26-201ENST00000445636 354 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 AC007182.2-201ENST00000489251 402 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 FAM92A1P2-202ENST00000504766 877 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.93□□□□□ -2.1
SNRNP200O75643 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNRNP200O75643 AMZ2P1-203ENST00000565833 850 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 AP003117.1-201ENST00000602771 554 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 KATNBL1P1-201ENST00000605192 748 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 AC120053.1-201ENST00000607706 736 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.93□□□□□ -2.1
SNRNP200O75643 AC026634.1-201ENST00000634369 198 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 FO624990.1-201ENST00000636373 85 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 PABPC1P9-201ENST00000426076 1612 ntBASIC1.93□□□□□ -2.1
SNRNP200O75643 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNRNP200O75643 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.92□□□□□ -2.1
SNRNP200O75643 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.92□□□□□ -2.1
SNRNP200O75643 ZNF519P1-201ENST00000449011 1626 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 SNORA14A-201ENST00000364773 135 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SNRNP200O75643 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.92□□□□□ -2.1
SNRNP200O75643 AC233981.1-201ENST00000423224 461 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.92□□□□□ -2.1
SNRNP200O75643 AC090515.1-201ENST00000465295 476 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 RPL21P131-201ENST00000497298 483 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.92□□□□□ -2.1
SNRNP200O75643 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.92□□□□□ -2.1
SNRNP200O75643 AC074029.1-201ENST00000552531 1044 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 RPP40P2-201ENST00000603596 712 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 HMGN2P28-201ENST00000606102 262 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 AC092159.4-201ENST00000624944 550 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.92□□□□□ -2.1
SNRNP200O75643 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNRNP200O75643 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNRNP200O75643 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNRNP200O75643 AC099654.7-201ENST00000635788 2127 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 MAPK10-266ENST00000641066 6555 ntBASIC1.92□□□□□ -2.1
SNRNP200O75643 RNU6-1251P-201ENST00000364502 107 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 SNORA40.18-201ENST00000391200 128 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AL591034.1-201ENST00000407447 340 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 MIR1289-2-201ENST00000408360 111 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 RNU4-65P-201ENST00000410473 140 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 RNU6-1077P-201ENST00000410506 102 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.91□□□□□ -2.1
SNRNP200O75643 AL513343.1-201ENST00000451818 792 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 HMGB1P15-201ENST00000453854 435 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AC027673.1-201ENST00000456245 405 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AC109486.1-201ENST00000486833 374 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.91□□□□□ -2.1
SNRNP200O75643 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.91□□□□□ -2.1
SNRNP200O75643 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.91□□□□□ -2.1
SNRNP200O75643 AC002984.1-201ENST00000591692 448 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AC025811.1-201ENST00000604312 472 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AC008083.4-201ENST00000615076 444 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 uc_338.9-201ENST00000617424 182 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AP003122.6-201ENST00000623831 495 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SNRNP200O75643 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
SNRNP200O75643 AC240504.1-201ENST00000395709 845 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 AF274854.1-201ENST00000413236 615 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 MTCYBP7-201ENST00000419540 1134 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 MTCO3P30-201ENST00000426425 670 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 RPL17P49-201ENST00000443728 411 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 SSXP4-201ENST00000451349 245 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 NF1P3-201ENST00000457709 450 ntBASIC1.91□□□□□ -2.1
SNRNP200O75643 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.91□□□□□ -2.1
SNRNP200O75643 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms