Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.06□□□□□ -1.44
PTCD1O75127 AP000857.1-201ENST00000532151 543 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCD1O75127 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCD1O75127 MIR4775-201ENST00000581168 75 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 uc_338.15-201ENST00000615470 191 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCD1O75127 U3.53-201ENST00000628922 216 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
PTCD1O75127 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 OR14L1P-202ENST00000641545 3009 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCD1O75127 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 ZNF137P-201ENST00000456718 1920 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCD1O75127 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCD1O75127 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCD1O75127 Y_RNA.445-201ENST00000384168 102 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 RNU6-1297P-201ENST00000384415 104 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTCD1O75127 RNU2-3P-201ENST00000410144 191 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 OR6C66P-201ENST00000414917 930 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCD1O75127 BEND7P1-201ENST00000422058 457 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 OR2AS1P-201ENST00000427827 319 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 MTCYBP9-201ENST00000431021 303 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 RPL23AP24-201ENST00000458203 385 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 RNU7-59P-201ENST00000459101 61 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 RPL21P126-201ENST00000470049 478 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCD1O75127 AC091885.1-201ENST00000506658 268 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 IGLVIV-65-201ENST00000517313 360 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCD1O75127 AL133271.1-201ENST00000538229 291 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 XIAPP1-201ENST00000603162 600 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 AL080274.1-201ENST00000605565 220 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 AC084781.2-201ENST00000615568 161 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 HMGB1P24-202ENST00000615653 685 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 AC091925.1-201ENST00000623204 462 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 AL136313.1-201ENST00000624804 202 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 MTND4LP32-201ENST00000636111 270 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 U6.114-201ENST00000636407 96 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCD1O75127 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCD1O75127 MUC2-202ENST00000613187 4845 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 MAPK10-338ENST00000641647 3362 ntBASIC6.05□□□□□ -1.44
PTCD1O75127 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
PTCD1O75127 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCD1O75127 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PTCD1O75127 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCD1O75127 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCD1O75127 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCD1O75127 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCD1O75127 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCD1O75127 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCD1O75127 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCD1O75127 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCD1O75127 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCD1O75127 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCD1O75127 AC021146.4-201ENST00000309229 279 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 SNORD116-29-201ENST00000384516 83 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 MIR659-201ENST00000384963 97 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCD1O75127 RNU2-29P-201ENST00000410423 189 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 AC068533.1-201ENST00000418542 415 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCD1O75127 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCD1O75127 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCD1O75127 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCD1O75127 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 Z95327.1-201ENST00000446082 482 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCD1O75127 AC097486.1-201ENST00000515331 210 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 RNU6-1038P-201ENST00000516516 104 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCD1O75127 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCD1O75127 MIR1254-2-201ENST00000579553 63 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 MIR3138-201ENST00000585238 82 ntBASIC6.04□□□□□ -1.44
PTCD1O75127 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCD1O75127 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCD1O75127 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCD1O75127 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCD1O75127 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCD1O75127 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PTCD1O75127 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCD1O75127 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PTCD1O75127 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PTCD1O75127 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCD1O75127 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCD1O75127 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCD1O75127 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCD1O75127 TAB3P1-202ENST00000452645 1634 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCD1O75127 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms