Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC080014.1-201ENST00000496877 1201 ntBASIC3.21□□□□□ -1.9
SDC3O75056 GTF2IP9-201ENST00000502460 301 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.21□□□□□ -1.9
SDC3O75056 TXNP6-201ENST00000510190 310 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC105914.1-201ENST00000511798 226 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC008837.2-201ENST00000513076 418 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC010265.1-201ENST00000513509 211 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.21□□□□□ -1.9
SDC3O75056 SNORA31.8-201ENST00000516327 108 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.21□□□□□ -1.9
SDC3O75056 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.21□□□□□ -1.9
SDC3O75056 AC018630.1-201ENST00000541376 925 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC022080.3-201ENST00000544433 482 ntBASIC3.21□□□□□ -1.9
SDC3O75056 TGIF1P1-201ENST00000558095 802 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.21□□□□□ -1.9
SDC3O75056 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.21□□□□□ -1.9
SDC3O75056 AC245036.5-201ENST00000596330 847 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AL109653.1-201ENST00000603091 248 ntBASIC3.21□□□□□ -1.9
SDC3O75056 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.21□□□□□ -1.9
SDC3O75056 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.21□□□□□ -1.9
SDC3O75056 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SDC3O75056 SGO1P2-201ENST00000429458 1589 ntBASIC3.21□□□□□ -1.9
SDC3O75056 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.21□□□□□ -1.9
SDC3O75056 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SDC3O75056 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.2□□□□□ -1.9
SDC3O75056 ZNF29P-201ENST00000225587 168 ntBASIC3.2□□□□□ -1.9
SDC3O75056 RNU4-92P-201ENST00000363783 136 ntBASIC3.2□□□□□ -1.9
SDC3O75056 Y_RNA.408-201ENST00000383987 102 ntBASIC3.2□□□□□ -1.9
SDC3O75056 RNU6-878P-201ENST00000384578 110 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC068533.2-201ENST00000411872 306 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC007899.1-201ENST00000412776 775 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC109780.2-201ENST00000413467 845 ntBASIC3.2□□□□□ -1.9
SDC3O75056 GLRXP1-201ENST00000423261 334 ntBASIC3.2□□□□□ -1.9
SDC3O75056 RPL23AP74-201ENST00000437246 471 ntBASIC3.2□□□□□ -1.9
SDC3O75056 HMGN2P20-201ENST00000437531 273 ntBASIC3.2□□□□□ -1.9
SDC3O75056 RPL23AP76-201ENST00000441860 458 ntBASIC3.2□□□□□ -1.9
SDC3O75056 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.2□□□□□ -1.9
SDC3O75056 AC008264.1-201ENST00000447612 367 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
SDC3O75056 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.2□□□□□ -1.9
SDC3O75056 S100A11P2-201ENST00000467589 312 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC087312.1-201ENST00000471411 480 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.2□□□□□ -1.9
SDC3O75056 AC020893.1-201ENST00000502452 580 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.2□□□□□ -1.9
SDC3O75056 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.2□□□□□ -1.9
SDC3O75056 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.2□□□□□ -1.9
SDC3O75056 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.2□□□□□ -1.9
SDC3O75056 SLC2A13P1-201ENST00000531560 322 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC024224.1-201ENST00000538284 609 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AC011602.1-201ENST00000546484 331 ntBASIC3.2□□□□□ -1.9
SDC3O75056 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.2□□□□□ -1.9
SDC3O75056 AL163153.1-201ENST00000554223 283 ntBASIC3.2□□□□□ -1.9
SDC3O75056 HSPE1P3-201ENST00000559254 309 ntBASIC3.2□□□□□ -1.9
SDC3O75056 COX6CP3-201ENST00000580869 223 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AP001269.3-201ENST00000588718 329 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.2□□□□□ -1.9
SDC3O75056 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.2□□□□□ -1.9
SDC3O75056 AL110115.1-201ENST00000614396 364 ntBASIC3.2□□□□□ -1.9
SDC3O75056 AL356321.1-201ENST00000621360 228 ntBASIC3.2□□□□□ -1.9
SDC3O75056 U6.101-201ENST00000637707 76 ntBASIC3.2□□□□□ -1.9
SDC3O75056 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SDC3O75056 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SDC3O75056 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SDC3O75056 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.2□□□□□ -1.9
SDC3O75056 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SDC3O75056 AC002546.1-201ENST00000588041 2504 ntBASIC3.2□□□□□ -1.9
SDC3O75056 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
SDC3O75056 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.19□□□□□ -1.9
SDC3O75056 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDC3O75056 RPL7P26-201ENST00000333817 754 ntBASIC3.19□□□□□ -1.9
SDC3O75056 SNORD51-201ENST00000384320 80 ntBASIC3.19□□□□□ -1.9
SDC3O75056 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SDC3O75056 SNRPEP2-201ENST00000397592 279 ntBASIC3.19□□□□□ -1.9
SDC3O75056 CYCSP45-201ENST00000402289 315 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AL138885.1-201ENST00000405921 675 ntBASIC3.19□□□□□ -1.9
SDC3O75056 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
SDC3O75056 RNU6-954P-201ENST00000411355 107 ntBASIC3.19□□□□□ -1.9
SDC3O75056 PSMA6P3-201ENST00000428242 164 ntBASIC3.19□□□□□ -1.9
SDC3O75056 RPL23AP69-201ENST00000431134 458 ntBASIC3.19□□□□□ -1.9
SDC3O75056 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.19□□□□□ -1.9
SDC3O75056 AC092427.1-201ENST00000439177 601 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AC025750.2-201ENST00000442609 450 ntBASIC3.19□□□□□ -1.9
SDC3O75056 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.19□□□□□ -1.9
SDC3O75056 NANOGNBP1-201ENST00000448444 480 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
SDC3O75056 TRGVB-201ENST00000453257 471 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AC092155.2-201ENST00000454675 477 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AC005410.1-202ENST00000460347 485 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
SDC3O75056 RPS15AP17-201ENST00000470598 390 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.19□□□□□ -1.9
SDC3O75056 AC011825.1-201ENST00000484967 388 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AC096576.1-201ENST00000489014 359 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.19□□□□□ -1.9
SDC3O75056 HMGB1P28-201ENST00000507778 552 ntBASIC3.19□□□□□ -1.9
SDC3O75056 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.19□□□□□ -1.9
SDC3O75056 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
SDC3O75056 AC104986.1-201ENST00000517978 436 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms