Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.39□□□□□ -1.71
PAX4O43316 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.39□□□□□ -1.71
PAX4O43316 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 AC011504.1-201ENST00000623331 4103 ntBASIC4.39□□□□□ -1.71
PAX4O43316 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
PAX4O43316 AC007342.5-201ENST00000571340 2142 ntBASIC4.39□□□□□ -1.71
PAX4O43316 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.39□□□□□ -1.71
PAX4O43316 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.39□□□□□ -1.71
PAX4O43316 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.39□□□□□ -1.71
PAX4O43316 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PAX4O43316 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 Y_RNA.23-201ENST00000362496 106 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RNU4-56P-201ENST00000364700 142 ntBASIC4.39□□□□□ -1.71
PAX4O43316 U8.8-201ENST00000365399 135 ntBASIC4.39□□□□□ -1.71
PAX4O43316 Y_RNA.357-201ENST00000365487 109 ntBASIC4.39□□□□□ -1.71
PAX4O43316 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.39□□□□□ -1.71
PAX4O43316 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 Y_RNA.446-201ENST00000384178 104 ntBASIC4.39□□□□□ -1.71
PAX4O43316 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PAX4O43316 HSPA8P15-201ENST00000401676 786 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RNA5SP251-201ENST00000410614 137 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RNU6-592P-201ENST00000411333 103 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RNA5SP107-201ENST00000411358 122 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RNA5SP111-201ENST00000411386 101 ntBASIC4.39□□□□□ -1.71
PAX4O43316 AC096921.1-201ENST00000411661 375 ntBASIC4.39□□□□□ -1.71
PAX4O43316 HMGN1P20-201ENST00000411849 300 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RPL7AP51-201ENST00000422016 760 ntBASIC4.39□□□□□ -1.71
PAX4O43316 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 AC011742.1-201ENST00000431448 434 ntBASIC4.39□□□□□ -1.71
PAX4O43316 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.39□□□□□ -1.71
PAX4O43316 AC097359.1-201ENST00000447946 463 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RN7SL552P-201ENST00000462094 276 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RN7SL221P-201ENST00000466190 281 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RPS18P6-201ENST00000476880 458 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RPL7AP10-201ENST00000481016 791 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RPL23AP55-201ENST00000498163 452 ntBASIC4.39□□□□□ -1.71
PAX4O43316 FCF1P8-201ENST00000510322 597 ntBASIC4.39□□□□□ -1.71
PAX4O43316 SNORA31.3-201ENST00000516029 96 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RNU7-121P-201ENST00000516604 62 ntBASIC4.39□□□□□ -1.71
PAX4O43316 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.39□□□□□ -1.71
PAX4O43316 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.39□□□□□ -1.71
PAX4O43316 AL133271.1-201ENST00000538229 291 ntBASIC4.39□□□□□ -1.71
PAX4O43316 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.39□□□□□ -1.71
PAX4O43316 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.39□□□□□ -1.71
PAX4O43316 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.39□□□□□ -1.71
PAX4O43316 RN7SL475P-201ENST00000583379 298 ntBASIC4.39□□□□□ -1.71
PAX4O43316 COX6CP7-201ENST00000597056 208 ntBASIC4.39□□□□□ -1.71
PAX4O43316 AL158032.1-201ENST00000605401 106 ntBASIC4.39□□□□□ -1.71
PAX4O43316 RNU6-84P-201ENST00000607737 102 ntBASIC4.39□□□□□ -1.71
PAX4O43316 AC244100.4-201ENST00000617747 388 ntBASIC4.39□□□□□ -1.71
PAX4O43316 AC025521.1-201ENST00000621624 286 ntBASIC4.39□□□□□ -1.71
PAX4O43316 MIR6823-201ENST00000622118 61 ntBASIC4.39□□□□□ -1.71
PAX4O43316 AC000123.2-201ENST00000623124 461 ntBASIC4.39□□□□□ -1.71
PAX4O43316 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.39□□□□□ -1.71
PAX4O43316 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.39□□□□□ -1.71
PAX4O43316 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PAX4O43316 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.39□□□□□ -1.71
PAX4O43316 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.39□□□□□ -1.71
PAX4O43316 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
PAX4O43316 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 AC012254.3-201ENST00000591183 2117 ntBASIC4.39□□□□□ -1.71
PAX4O43316 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PAX4O43316 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PAX4O43316 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PAX4O43316 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PAX4O43316 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PAX4O43316 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.38□□□□□ -1.71
PAX4O43316 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
PAX4O43316 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PAX4O43316 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PAX4O43316 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.38□□□□□ -1.71
PAX4O43316 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PAX4O43316 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.38□□□□□ -1.71
PAX4O43316 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PAX4O43316 SNORA25.1-201ENST00000362326 128 ntBASIC4.38□□□□□ -1.71
PAX4O43316 RNA5SP258-201ENST00000362750 119 ntBASIC4.38□□□□□ -1.71
PAX4O43316 Y_RNA.136-201ENST00000363444 102 ntBASIC4.38□□□□□ -1.71
PAX4O43316 U3.13-201ENST00000364804 214 ntBASIC4.38□□□□□ -1.71
PAX4O43316 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PAX4O43316 RNU6-946P-201ENST00000383878 107 ntBASIC4.38□□□□□ -1.71
PAX4O43316 RNU6-245P-201ENST00000384020 107 ntBASIC4.38□□□□□ -1.71
PAX4O43316 MIR320B1-201ENST00000390209 79 ntBASIC4.38□□□□□ -1.71
PAX4O43316 Y_RNA.623-201ENST00000411128 95 ntBASIC4.38□□□□□ -1.71
PAX4O43316 RPL23AP26-201ENST00000412728 464 ntBASIC4.38□□□□□ -1.71
PAX4O43316 HMGA1P8-201ENST00000414130 321 ntBASIC4.38□□□□□ -1.71
PAX4O43316 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.38□□□□□ -1.71
PAX4O43316 AC092573.2-201ENST00000434546 243 ntBASIC4.38□□□□□ -1.71
PAX4O43316 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.38□□□□□ -1.71
PAX4O43316 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.38□□□□□ -1.71
PAX4O43316 AL133351.3-201ENST00000454998 193 ntBASIC4.38□□□□□ -1.71
PAX4O43316 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.38□□□□□ -1.71
PAX4O43316 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms