Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
UBFD1O14562 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
UBFD1O14562 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
UBFD1O14562 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBFD1O14562 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
UBFD1O14562 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
UBFD1O14562 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBFD1O14562 ENSAP3-201ENST00000312710 333 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 SNORD115-48-201ENST00000364764 76 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.33□□□□□ -2.04
UBFD1O14562 AC092745.2-202ENST00000411880 369 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.33□□□□□ -2.04
UBFD1O14562 HMGB3P31-201ENST00000413333 595 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.33□□□□□ -2.04
UBFD1O14562 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.33□□□□□ -2.04
UBFD1O14562 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.33□□□□□ -2.04
UBFD1O14562 MTND2P6-201ENST00000455337 1030 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.33□□□□□ -2.04
UBFD1O14562 AC104472.2-201ENST00000469035 601 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AC087879.1-201ENST00000474343 374 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AC015724.1-201ENST00000478577 156 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.33□□□□□ -2.04
UBFD1O14562 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UBFD1O14562 YWHAEP4-201ENST00000505390 198 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AP004371.1-201ENST00000525240 214 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AP001646.1-201ENST00000527936 915 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.33□□□□□ -2.04
UBFD1O14562 AC109635.4-202ENST00000531666 412 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AC067805.1-201ENST00000559344 470 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AP001542.1-201ENST00000591314 200 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AL049779.4-201ENST00000604500 156 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 HSPE1P14-201ENST00000605812 302 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.33□□□□□ -2.04
UBFD1O14562 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.33□□□□□ -2.04
UBFD1O14562 FO624990.1-201ENST00000636373 85 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AC083865.1-201ENST00000636634 831 ntBASIC2.33□□□□□ -2.04
UBFD1O14562 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBFD1O14562 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
UBFD1O14562 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBFD1O14562 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
UBFD1O14562 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBFD1O14562 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UBFD1O14562 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 FO393413.1-201ENST00000402892 195 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.32□□□□□ -2.04
UBFD1O14562 NPM1P11-201ENST00000417106 855 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.32□□□□□ -2.04
UBFD1O14562 RPS7P2-201ENST00000435134 607 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AL513328.1-201ENST00000446460 224 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AC092685.1-201ENST00000447960 1243 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.32□□□□□ -2.04
UBFD1O14562 AC010285.1-201ENST00000470580 392 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AP000852.1-201ENST00000472460 573 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.32□□□□□ -2.04
UBFD1O14562 SNORA31.1-201ENST00000515993 133 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 RNU1-61P-201ENST00000516107 151 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 SNORA31.5-201ENST00000516190 133 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.32□□□□□ -2.04
UBFD1O14562 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.32□□□□□ -2.04
UBFD1O14562 OR4R2P-201ENST00000530815 597 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBFD1O14562 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.32□□□□□ -2.04
UBFD1O14562 AC234778.2-201ENST00000566241 354 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 DUXAP3-201ENST00000603616 594 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AC021851.1-201ENST00000608537 1082 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AC087241.4-201ENST00000612441 480 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.32□□□□□ -2.04
UBFD1O14562 STMN1P1-201ENST00000617809 440 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.32□□□□□ -2.04
UBFD1O14562 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.32□□□□□ -2.04
UBFD1O14562 AC024595.1-201ENST00000623088 387 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AC104820.1-201ENST00000624183 307 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 AC016717.2-201ENST00000609089 5141 ntBASIC2.32□□□□□ -2.04
UBFD1O14562 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.32□□□□□ -2.04
UBFD1O14562 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
UBFD1O14562 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 SNORD51.1-201ENST00000365405 77 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 SNORA70B-201ENST00000384210 135 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 Y_RNA.493-201ENST00000384422 102 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.31□□□□□ -2.04
UBFD1O14562 AL121890.1-201ENST00000435457 205 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 RABEPKP1-201ENST00000440529 1026 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 AC114878.1-201ENST00000441166 358 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 MTND1P33-201ENST00000446251 917 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.31□□□□□ -2.04
UBFD1O14562 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.31□□□□□ -2.04
UBFD1O14562 HMGB1P15-201ENST00000453854 435 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.31□□□□□ -2.04
UBFD1O14562 snoU13.3-201ENST00000459441 104 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms