Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL133507.1-201ENST00000605269 557 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 AL355810.1-201ENST00000614629 552 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.01□□□□□ -2.09
SDCBPO00560 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.01□□□□□ -2.09
SDCBPO00560 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SDCBPO00560 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SDCBPO00560 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2□□□□□ -2.09
SDCBPO00560 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SDCBPO00560 ARF4P3-201ENST00000397387 509 ntBASIC2□□□□□ -2.09
SDCBPO00560 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2□□□□□ -2.09
SDCBPO00560 RPS3AP9-201ENST00000417027 792 ntBASIC2□□□□□ -2.09
SDCBPO00560 AC244453.4-201ENST00000419150 388 ntBASIC2□□□□□ -2.09
SDCBPO00560 FCF1P1-201ENST00000432690 571 ntBASIC2□□□□□ -2.09
SDCBPO00560 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2□□□□□ -2.09
SDCBPO00560 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2□□□□□ -2.09
SDCBPO00560 MTND1P33-201ENST00000446251 917 ntBASIC2□□□□□ -2.09
SDCBPO00560 OR51B8P-201ENST00000449892 769 ntBASIC2□□□□□ -2.09
SDCBPO00560 AL109933.2-201ENST00000452651 260 ntBASIC2□□□□□ -2.09
SDCBPO00560 DNAJC19P8-201ENST00000452887 259 ntBASIC2□□□□□ -2.09
SDCBPO00560 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2□□□□□ -2.09
SDCBPO00560 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2□□□□□ -2.09
SDCBPO00560 SNORA31.8-201ENST00000516327 108 ntBASIC2□□□□□ -2.09
SDCBPO00560 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2□□□□□ -2.09
SDCBPO00560 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2□□□□□ -2.09
SDCBPO00560 NBEAP1-201ENST00000554452 979 ntBASIC2□□□□□ -2.09
SDCBPO00560 AL160281.1-201ENST00000605307 311 ntBASIC2□□□□□ -2.09
SDCBPO00560 AL355802.4-201ENST00000607635 548 ntBASIC2□□□□□ -2.09
SDCBPO00560 AC011890.2-201ENST00000613393 294 ntBASIC2□□□□□ -2.09
SDCBPO00560 MIR6817-201ENST00000615588 66 ntBASIC2□□□□□ -2.09
SDCBPO00560 AC025016.1-201ENST00000616746 682 ntBASIC2□□□□□ -2.09
SDCBPO00560 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2□□□□□ -2.09
SDCBPO00560 AC091564.4-201ENST00000533934 2194 ntBASIC2□□□□□ -2.09
SDCBPO00560 AC011460.1-201ENST00000636268 1834 ntBASIC2□□□□□ -2.09
SDCBPO00560 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
SDCBPO00560 AC138915.1-201ENST00000565427 1685 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.99□□□□□ -2.09
SDCBPO00560 ENSAP3-201ENST00000312710 333 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 MIRLET7G-201ENST00000362280 84 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AL359511.1-201ENST00000402970 211 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 RNU2-17P-201ENST00000410290 190 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AC092745.2-202ENST00000411880 369 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 MTCO3P12-201ENST00000416718 547 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 FNDC3CP-201ENST00000420795 1155 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SDCBPO00560 AC006548.1-201ENST00000427470 102 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 PTP4A1P3-201ENST00000433661 420 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 ATP5F1P1-201ENST00000433775 569 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.99□□□□□ -2.09
SDCBPO00560 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.99□□□□□ -2.09
SDCBPO00560 AC234775.1-201ENST00000454247 670 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 TRBV26-201ENST00000456572 344 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.99□□□□□ -2.09
SDCBPO00560 OR5H5P-201ENST00000503164 928 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 UBTFL10-201ENST00000528532 562 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AC093014.1-201ENST00000548926 724 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.99□□□□□ -2.09
SDCBPO00560 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.99□□□□□ -2.09
SDCBPO00560 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SDCBPO00560 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.99□□□□□ -2.09
SDCBPO00560 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.99□□□□□ -2.09
SDCBPO00560 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.99□□□□□ -2.09
SDCBPO00560 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.99□□□□□ -2.09
SDCBPO00560 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.99□□□□□ -2.09
SDCBPO00560 AC025588.3-201ENST00000604182 274 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AP001330.4-201ENST00000604350 154 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AC067747.1-201ENST00000608026 250 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AC021851.1-201ENST00000608537 1082 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 STMN1P1-201ENST00000617809 440 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AC002064.3-201ENST00000623448 346 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AP003485.2-201ENST00000623636 610 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 AL109659.3-201ENST00000624985 950 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 CR381572.1-201ENST00000625098 102 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SDCBPO00560 ZNF720P1-201ENST00000562403 1939 ntBASIC1.99□□□□□ -2.09
SDCBPO00560 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SDCBPO00560 SGO1P2-201ENST00000429458 1589 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.98□□□□□ -2.09
SDCBPO00560 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.98□□□□□ -2.09
SDCBPO00560 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SDCBPO00560 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SDCBPO00560 FTLP6-201ENST00000355274 422 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 RNA5SP68-201ENST00000363885 119 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SDCBPO00560 OR5H15-201ENST00000383696 930 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 RNU6-1005P-201ENST00000384519 107 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 RNU6-272P-201ENST00000411028 104 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.98□□□□□ -2.09
SDCBPO00560 HMGB3P31-201ENST00000413333 595 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 OR4K6P-201ENST00000416478 897 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 USP9YP27-201ENST00000418455 438 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 PAICSP7-201ENST00000419829 962 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 RPL21P32-201ENST00000419877 477 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 TPTE2P1-204ENST00000435256 593 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 FABP5P3-201ENST00000437960 408 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AL513321.1-201ENST00000441175 761 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms