Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC104986.1-201ENST00000517978 436 ntBASIC3.12□□□□□ -1.91
CLDN5O00501 AC091163.3-201ENST00000518269 1144 ntBASIC3.12□□□□□ -1.91
CLDN5O00501 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN5O00501 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN5O00501 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN5O00501 MTND3P13-201ENST00000574391 343 ntBASIC3.12□□□□□ -1.91
CLDN5O00501 BDH2P1-201ENST00000602288 736 ntBASIC3.12□□□□□ -1.91
CLDN5O00501 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN5O00501 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN5O00501 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN5O00501 AC099654.8-201ENST00000637757 681 ntBASIC3.12□□□□□ -1.91
CLDN5O00501 MIR1322-201ENST00000638013 71 ntBASIC3.12□□□□□ -1.91
CLDN5O00501 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN5O00501 AP002907.1-201ENST00000606361 1430 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 CDR1-202ENST00000625883 1485 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CLDN5O00501 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CLDN5O00501 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CLDN5O00501 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLDN5O00501 RNU4-51P-201ENST00000364206 140 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 SNORA40.2-201ENST00000390847 128 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AL122016.1-201ENST00000403365 367 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 RNU2-47P-201ENST00000410649 186 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 Z75741.2-201ENST00000417272 1167 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AL137014.1-201ENST00000420490 1226 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 UBE2D3P2-201ENST00000424409 445 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 ARF4P2-201ENST00000430209 526 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN5O00501 AC025750.2-201ENST00000442609 450 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AC125238.1-201ENST00000448842 249 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AL162389.1-201ENST00000449233 177 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN5O00501 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN5O00501 AP001486.1-201ENST00000463339 476 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AC096571.1-202ENST00000506634 735 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 CBX3P3-201ENST00000508108 532 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN5O00501 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN5O00501 VN1R83P-201ENST00000595685 445 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AC106900.2-201ENST00000604994 317 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AC093732.2-201ENST00000607950 274 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AC106028.5-201ENST00000610332 395 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 VIS1.1-201ENST00000610517 203 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 PART1_2.1-201ENST00000612397 250 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AC024257.5-201ENST00000612739 531 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AL356585.4-201ENST00000623078 1229 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 OR1S1-201ENST00000624470 978 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AL136164.4-201ENST00000625013 2135 ntBASIC3.11□□□□□ -1.91
CLDN5O00501 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN5O00501 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN5O00501 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN5O00501 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN5O00501 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN5O00501 RNU6-173P-201ENST00000364215 104 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 U3.42-201ENST00000408746 214 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 RPL7P30-201ENST00000420888 709 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 COTL1P1-201ENST00000422309 375 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 HMGN2P20-201ENST00000437531 273 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 TXNP1-201ENST00000441872 371 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 RPL17P49-201ENST00000443728 411 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AL049830.2-201ENST00000480072 201 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 RN7SL633P-201ENST00000488974 297 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AC023424.2-201ENST00000493479 777 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 TMEM251P1-201ENST00000503717 318 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 COX7A2P2-201ENST00000505291 250 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN5O00501 AL391156.1-201ENST00000554965 554 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN5O00501 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CLDN5O00501 MIR4474-201ENST00000579189 78 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 MIR4637-201ENST00000582405 84 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AL022099.1-201ENST00000604551 712 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AL137843.1-201ENST00000605078 385 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AL158050.2-201ENST00000605336 568 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AF129408.1-201ENST00000608767 431 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AC068831.7-201ENST00000616954 363 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 AC018816.2-201ENST00000621460 353 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN5O00501 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN5O00501 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLDN5O00501 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN5O00501 OR4G11P-202ENST00000642116 1414 ntBASIC3.1□□□□□ -1.91
CLDN5O00501 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN5O00501 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN5O00501 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN5O00501 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CLDN5O00501 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN5O00501 AC002546.1-201ENST00000588041 2504 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLDN5O00501 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 SNORA18.3-201ENST00000384122 132 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 HMGB3P23-201ENST00000414981 585 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 MTCO1P39-201ENST00000426148 480 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 MTND2P5-201ENST00000432656 1006 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 MUPP-201ENST00000438111 566 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 HIGD1AP11-201ENST00000438361 280 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 MTCYBP31-201ENST00000438855 1122 ntBASIC3.09□□□□□ -1.91
CLDN5O00501 AL645638.1-201ENST00000440519 361 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms