Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MTCO3P11-201ENST00000455103 774 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AC233279.1-201ENST00000455300 423 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AP002345.1-201ENST00000456493 928 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 RPL7P49-201ENST00000471402 708 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AC079203.1-201ENST00000487972 404 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AC008083.2-201ENST00000546707 476 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 SETP7-201ENST00000552169 453 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 MIR4419B-201ENST00000577260 68 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AP001521.1-201ENST00000609150 300 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 MIR7106-201ENST00000612419 65 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 SDR42E1P2-201ENST00000614861 481 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AC010378.1-201ENST00000619270 362 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AP006437.1-201ENST00000641440 3685 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 FTLP6-201ENST00000355274 422 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 Y_RNA.126-201ENST00000363382 111 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC004022.2-201ENST00000413824 193 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 TOMM22P1-201ENST00000418578 312 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC008280.1-201ENST00000418851 412 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AL139413.1-201ENST00000421309 217 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC005002.1-201ENST00000447458 540 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 SNORA84-201ENST00000459229 133 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 RNU4-29P-201ENST00000515943 174 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC109329.2-201ENST00000519658 482 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 CASP1P1-201ENST00000526345 212 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AP002770.2-201ENST00000543613 532 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC090751.1-201ENST00000566966 267 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 DEFB122-202ENST00000569013 197 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 MIR4444-1-201ENST00000581696 74 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 MIR4444-2-201ENST00000584390 74 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC106791.2-201ENST00000604680 391 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC005000.2-201ENST00000605468 310 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 CR589904.2-201ENST00000612533 440 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
LINC01549A6NIU2 MTCO1P4-201ENST00000520516 1409 ntBASIC1.29□□□□□ -2.2
LINC01549A6NIU2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 RPL5P13-201ENST00000462840 709 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC097493.1-201ENST00000463958 372 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC128713.1-201ENST00000471495 306 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC108120.2-201ENST00000512973 294 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC034244.2-201ENST00000514668 858 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 GTF2IP8-201ENST00000560687 584 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AGGF1P5-201ENST00000567900 919 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 HMGB1P6-201ENST00000569046 646 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 RPP40P2-201ENST00000603596 712 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC026790.2-201ENST00000606282 430 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 HMGB1P24-202ENST00000615653 685 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AP003485.2-201ENST00000623636 610 ntBASIC1.28□□□□□ -2.2
LINC01549A6NIU2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01549A6NIU2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC110792.3-201ENST00000595906 1614 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 SNORA71.3-201ENST00000362582 128 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 SNORA3A-201ENST00000364113 130 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC019129.1-201ENST00000403786 261 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AL590290.1-201ENST00000405336 380 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 RPS3AP25-201ENST00000411660 793 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AL139156.1-201ENST00000412785 841 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 SNORD56-201ENST00000413522 71 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms