Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
MBD3L4A6NDZ8 GABPAP-201ENST00000419271 1356 ntBASIC4□□□□□ -1.77
MBD3L4A6NDZ8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
MBD3L4A6NDZ8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AP001273.1-201ENST00000624493 3152 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 OR5P1P-201ENST00000299512 925 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 Y_RNA.22-201ENST00000362492 102 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 SNORA7.2-201ENST00000364446 145 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 RNU6-74P-201ENST00000384235 107 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 Y_RNA.573-201ENST00000384763 105 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC110754.1-201ENST00000399740 601 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC097374.1-203ENST00000400783 485 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 RN7SKP263-201ENST00000411194 309 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 JKAMPP1-201ENST00000413804 919 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 MRPL50P2-201ENST00000416821 482 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 MTATP6P4-201ENST00000427725 675 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC000111.3-201ENST00000433478 193 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC122718.1-201ENST00000439448 744 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 NFU1P2-201ENST00000448700 469 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 RPS24P6-201ENST00000452670 400 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 RNU7-63P-201ENST00000459054 62 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 FAM133DP-201ENST00000464802 691 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 VN1R105P-201ENST00000486595 910 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC078817.1-201ENST00000492623 435 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 HSPD1P15-201ENST00000505573 1122 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC026427.2-201ENST00000506228 536 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 HMGB3P16-201ENST00000508037 287 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 RNU6-1073P-201ENST00000517182 106 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 MTND1P35-201ENST00000526739 508 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AP001646.1-201ENST00000527936 915 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 SNRPGP16-201ENST00000533275 226 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 RPS3AP4-201ENST00000555161 764 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 OR4H12P-201ENST00000556269 907 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 HMGB1P6-201ENST00000569046 646 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 BPIFA4P-203ENST00000603168 689 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AP000907.4-201ENST00000604143 237 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AP001330.4-201ENST00000604350 154 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC091979.2-201ENST00000607514 214 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC104458.1-201ENST00000608243 463 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AL360181.4-201ENST00000621752 134 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC110801.1-201ENST00000623590 212 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 MIR1321-201ENST00000637766 79 ntBASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MBD3L4A6NDZ8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 AC009812.4-201ENST00000569134 1805 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 AC139769.1-204ENST00000472297 1931 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 AC073343.1-201ENST00000328239 651 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 RNU6-188P-201ENST00000364207 107 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 RNU5E-6P-201ENST00000365574 115 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 UBBP2-201ENST00000376781 231 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 AL359634.1-202ENST00000404721 284 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 RNU2-39P-201ENST00000410604 198 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 AC011933.1-201ENST00000413334 321 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 SDCBPP3-201ENST00000419629 891 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 AC093106.2-201ENST00000428212 385 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 FTH1P6-201ENST00000430768 320 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 PHBP16-201ENST00000446318 950 ntBASIC3.98□□□□□ -1.77
MBD3L4A6NDZ8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms