Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 Y_RNA.493-201ENST00000384422 102 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 MIR181A1-201ENST00000385026 110 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 MIR670-201ENST00000390142 98 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 RNA5SP171-201ENST00000391071 115 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AL583835.1-201ENST00000399570 407 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC097374.1-203ENST00000400783 485 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 RNA5SP56-201ENST00000410277 118 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 RPL21P91-201ENST00000429231 479 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 RPS26P2-201ENST00000440331 348 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 RPL17P49-201ENST00000443728 411 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AL353691.1-201ENST00000451332 387 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 snoU109.4-201ENST00000458953 143 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 RPL35AP15-201ENST00000468042 339 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC021382.1-201ENST00000483523 359 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC079382.1-201ENST00000493346 557 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 SNORA20.3-201ENST00000516880 132 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AP003122.4-201ENST00000530980 758 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 SETP2-201ENST00000553886 926 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC034268.2-201ENST00000571784 482 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 MIR3913-1-201ENST00000577744 102 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AL669831.4-202ENST00000590817 238 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC011468.4-201ENST00000603942 409 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 RNU6-87P-201ENST00000607561 108 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AL445363.3-201ENST00000623080 671 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 ZNF680P1-201ENST00000436625 1469 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 AC092326.2-201ENST00000624772 1561 ntBASIC4.09□□□□□ -1.75
CCDC187A0A096LP49 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.09□□□□□ -1.76
CCDC187A0A096LP49 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.09□□□□□ -1.76
CCDC187A0A096LP49 AC090337.1-201ENST00000579651 2074 ntBASIC4.09□□□□□ -1.76
CCDC187A0A096LP49 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 RLIMP1-201ENST00000339626 1680 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 RNU6-821P-201ENST00000390995 107 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 SNORD115-47-201ENST00000391226 86 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 Z74021.1-201ENST00000423610 407 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AL353777.1-201ENST00000425552 326 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC009961.2-201ENST00000435771 251 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 GAPDHP17-201ENST00000449858 1001 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC098824.1-201ENST00000453565 980 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 FGF7P3-201ENST00000454645 303 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 RPL23AP81-201ENST00000455252 467 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC010469.1-201ENST00000463864 576 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC146944.2-203ENST00000502493 354 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC006390.1-201ENST00000508068 283 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 STMN1P2-201ENST00000508435 439 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 NPM1P41-201ENST00000512920 831 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC139495.1-202ENST00000513164 354 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 RNU6-430P-201ENST00000517078 107 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms