Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 AC004656.1-201ENST00000568479 4951 ntBASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 AC109446.4-201ENST00000623235 2755 ntBASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HCN4Q9Y3Q4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
HCN4Q9Y3Q4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 SNORA17.1-201ENST00000362945 126 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-525P-201ENST00000363685 104 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 Y_RNA.380-201ENST00000365663 111 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 SMIM11P1-201ENST00000369586 178 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 Y_RNA.473-201ENST00000384333 102 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-101P-201ENST00000410323 104 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RPL21P24-201ENST00000413752 448 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC099677.3-201ENST00000427081 395 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AL590399.2-201ENST00000427536 309 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RPL23AP33-201ENST00000442301 452 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 FTH1P25-201ENST00000447665 469 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC002553.2-201ENST00000453217 340 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 CEACAMP4-201ENST00000457676 421 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AP001086.1-201ENST00000494882 321 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC022493.2-201ENST00000506122 481 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RNU2-69P-201ENST00000516061 100 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-1332P-201ENST00000516666 104 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 CYCSP27-201ENST00000527643 293 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AP006289.1-201ENST00000538089 277 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC110743.1-201ENST00000584870 478 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 MIR132-201ENST00000591554 101 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AL355297.3-201ENST00000604082 446 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AL670379.4-201ENST00000605279 254 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AL365434.2-201ENST00000607979 234 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 MTCO1P24-201ENST00000515438 1558 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 AC074029.4-201ENST00000624796 1859 ntBASIC5.71□□□□□ -1.5
HCN4Q9Y3Q4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 SNORD62.1-201ENST00000362541 86 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 RNU1-146P-201ENST00000364015 165 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-95P-201ENST00000384697 107 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-823P-201ENST00000391042 103 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 GLULP6-201ENST00000399502 913 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 MIR548I3-201ENST00000408378 149 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 MIR548I1-201ENST00000408810 149 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 RNU6-603P-201ENST00000411403 107 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 EIF4EP1-201ENST00000422311 642 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 MTCO3P45-201ENST00000443036 613 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AURKAPS2-201ENST00000454983 333 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 snoU109.4-201ENST00000458953 143 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 RNY3P15-201ENST00000516297 97 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AC022882.1-201ENST00000532142 501 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AC034105.4-201ENST00000568304 277 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 TXNP4-201ENST00000575018 310 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AC005899.2-201ENST00000584353 90 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AC174048.1-201ENST00000603389 144 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AC104118.1-201ENST00000607625 1589 ntBASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HCN4Q9Y3Q4 AC107027.3-201ENST00000565095 3473 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms