Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 Y_RNA.401-201ENST00000383965 117 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.481-201ENST00000384373 102 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 SNORD66.1-201ENST00000391230 76 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MIR548P-201ENST00000408336 84 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 RNU6-373P-201ENST00000411247 98 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AL359704.1-201ENST00000411586 781 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC109780.2-201ENST00000413467 845 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AP000907.1-201ENST00000428428 510 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 CBX3P6-201ENST00000430257 527 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 CYCSP43-201ENST00000438233 310 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC006011.1-201ENST00000442758 349 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MTND6P5-201ENST00000448266 512 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MTCO3P20-201ENST00000454926 688 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 PPIAP15-201ENST00000479662 484 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC093278.1-201ENST00000494700 600 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC093853.1-201ENST00000515689 483 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MIR5685-201ENST00000579080 79 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC012507.3-201ENST00000603556 477 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 SUMO2P14-201ENST00000604488 293 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AL592436.1-201ENST00000605135 558 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AL078596.1-201ENST00000624856 447 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AL034408.1-202ENST00000636088 415 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 EOGT-210ENST00000615922 1931 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RNU6-483P-201ENST00000384088 108 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RNU6-510P-201ENST00000391239 108 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RNU4-6P-201ENST00000410804 122 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RNU6-847P-201ENST00000411115 108 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RPS7P15-201ENST00000415804 584 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RPL36AP10-201ENST00000421785 322 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RPS27AP14-201ENST00000422868 454 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 IFNA20P-201ENST00000436840 528 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RPL7P12-201ENST00000446719 750 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AL031584.1-201ENST00000447169 754 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 PPIAP3-201ENST00000450588 505 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RPL23AP35-201ENST00000451906 501 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AL163540.1-201ENST00000485382 386 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AC105417.1-201ENST00000514691 285 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RN7SKP31-201ENST00000516354 278 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 IFITM8P-201ENST00000522529 394 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 DYNLL1P4-201ENST00000549314 266 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 WDR61-205ENST00000558459 884 ntTSL 3 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 HMGB1P24-202ENST00000615653 685 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 AC091905.2-201ENST00000623143 306 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 CRYM-AS1-204ENST00000637983 556 ntBASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NOTCH3Q9UM47 OR11H4-201ENST00000315409 1082 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 MIR369-201ENST00000362155 70 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 RNU6-723P-201ENST00000383973 107 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.474-201ENST00000384341 102 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 MIR30B-201ENST00000384850 88 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 MIR490-201ENST00000384865 128 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 MIR921-201ENST00000401133 56 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 SNORA3.3-201ENST00000408712 125 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 RNA5SP118-201ENST00000410385 109 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 RNU6-248P-201ENST00000410720 107 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 RPS3AP3-201ENST00000411933 242 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AL590806.1-201ENST00000415818 853 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC009961.2-201ENST00000435771 251 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 RPL23AP20-201ENST00000447965 421 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms