Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC012435.1-202ENST00000568772 240 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC135628.1-201ENST00000568867 534 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AP001004.1-201ENST00000582468 324 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC022916.3-201ENST00000592961 742 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC007687.1-201ENST00000602704 304 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC015967.1-201ENST00000619893 476 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC078883.4-201ENST00000623218 367 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC092192.1-201ENST00000633154 1018 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 OR8B1P-202ENST00000641132 1178 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 PWAR6-201ENST00000552334 4618 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 U8.11-201ENST00000384699 133 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 U8.12-201ENST00000384701 133 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 MIR1305-201ENST00000408300 86 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 RNA5SP31-201ENST00000411144 127 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 BX119904.4-201ENST00000424402 301 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 RSL24D1P6-201ENST00000426934 401 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC017083.1-201ENST00000428093 483 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 MTATP6P26-201ENST00000445926 662 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 U8.18-201ENST00000459285 133 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC004062.1-201ENST00000509926 645 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 MIR544B-201ENST00000582372 78 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC013444.2-201ENST00000603317 787 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC006254.3-201ENST00000603353 884 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC107214.2-201ENST00000608204 634 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC103710.4-201ENST00000609301 899 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 ZYXP1-201ENST00000617638 118 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AF246928.1-201ENST00000623768 87 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC119674.1-207ENST00000641355 633 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 MFSD8-236ENST00000641509 4050 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 AC007823.1-201ENST00000569932 1566 ntBASIC3.85□□□□□ -1.79
LIMA1Q9UHB6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 RNU6-853P-201ENST00000364306 107 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 Y_RNA.560-201ENST00000384689 102 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 HSFY4P-201ENST00000415994 1181 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC091862.1-201ENST00000438016 1100 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC006539.3-201ENST00000454258 129 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC092451.1-201ENST00000480211 153 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC021382.1-201ENST00000483523 359 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC034222.1-201ENST00000494052 532 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC093278.1-201ENST00000494700 600 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 OR2A20P-203ENST00000498397 1268 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 NDUFB4P9-201ENST00000511646 388 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 RNU6-528P-201ENST00000516926 100 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 MIR2116-201ENST00000517221 80 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 OR8R1P-201ENST00000543943 764 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 OR4K8P-201ENST00000578842 1048 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 MIR4286-201ENST00000580651 93 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC002550.2-201ENST00000621246 394 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AL360181.4-201ENST00000621752 134 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AL356266.1-201ENST00000623311 483 ntBASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMA1Q9UHB6 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms