Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC087385.1-201ENST00000475062 312 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 HMGN1P13-201ENST00000505795 138 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC114797.1-201ENST00000514003 728 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 SNORA19.2-201ENST00000516013 114 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 RNU2-10P-201ENST00000516375 211 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 RNA5SP360-201ENST00000516555 118 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 BNIP3P6-201ENST00000549284 499 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC105129.1-201ENST00000560250 297 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 RN7SL652P-201ENST00000577769 300 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 MIR4270-201ENST00000581799 70 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 MIR4795-201ENST00000584182 89 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC010525.2-201ENST00000590920 195 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC005034.5-201ENST00000604219 466 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 uc_338.5-201ENST00000611839 155 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AL442067.2-201ENST00000614033 363 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC079684.1-201ENST00000621405 437 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC090574.1-201ENST00000623186 233 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AC108751.5-201ENST00000492880 1336 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 AL445487.1-201ENST00000415694 1580 ntBASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PPARGC1AQ9UBK2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RNU4-79P-201ENST00000362764 141 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RNU1-83P-201ENST00000363426 164 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RNVU1-6-201ENST00000364688 164 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AL162578.1-201ENST00000406202 378 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RNU6-193P-201ENST00000410977 107 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC140479.3-201ENST00000418944 1126 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC073415.1-201ENST00000449240 153 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AL513533.1-201ENST00000453728 415 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 IGLV2-34-201ENST00000490007 283 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 EIF4EP3-201ENST00000498782 656 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 Y_RNA.701-201ENST00000516812 110 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 SUB1P1-201ENST00000524415 382 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 SETP7-201ENST00000552169 453 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC011611.1-201ENST00000552179 197 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RN7SL690P-201ENST00000582087 240 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC100827.5-201ENST00000615883 426 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC099669.2-201ENST00000616549 437 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AC100810.6-201ENST00000638068 285 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 AL136964.1-201ENST00000622038 2990 ntBASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PPARGC1AQ9UBK2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 PABPC1P7-201ENST00000413177 1513 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 DHX40P1-201ENST00000588725 1412 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 MAPK10-303ENST00000641324 3959 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 Y_RNA.22-201ENST00000362492 102 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 U3.15-201ENST00000365398 212 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 RNU6-339P-201ENST00000384310 107 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AL591416.1-201ENST00000404015 867 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms