Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AC004944.1-201ENST00000517807 3059 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AC138915.1-201ENST00000565427 1685 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 RNA5SP258-201ENST00000362750 119 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 RNA5SP126-201ENST00000365092 109 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 RNU6-619P-201ENST00000365146 108 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 RNU6-549P-201ENST00000384433 107 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 PAICSP7-201ENST00000419829 962 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AC093151.1-201ENST00000427711 313 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 RPL23AP20-201ENST00000447965 421 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL590664.1-201ENST00000448065 339 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 NIPA2P5-201ENST00000452282 464 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 RPL21P18-201ENST00000469899 480 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AC091057.2-201ENST00000602594 792 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL355810.1-201ENST00000614629 552 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC10Q9NYD6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 FTLP6-201ENST00000355274 422 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 RNVU1-3-201ENST00000364313 161 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 RNU6-468P-201ENST00000384003 109 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AL360182.1-201ENST00000397433 468 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 RPS4XP3-201ENST00000398541 413 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 RPS4XP8-201ENST00000402039 771 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 RNA5SP492-201ENST00000411330 114 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 OR51A3P-201ENST00000413596 924 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AC006548.1-201ENST00000427470 102 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 RPL36P19-201ENST00000430744 301 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 RN7SL633P-201ENST00000488974 297 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AC068657.1-201ENST00000520807 306 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 EIF5A2P1-201ENST00000564027 460 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AC019159.1-201ENST00000605094 187 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 RPL21P136-201ENST00000605378 396 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AC026741.1-201ENST00000605892 482 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 AC008759.3-201ENST00000613300 508 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 CR381572.1-201ENST00000625098 102 ntBASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC10Q9NYD6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 SGO1P1-201ENST00000603525 1447 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 RNU6-207P-201ENST00000384137 107 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 RNU6-339P-201ENST00000384310 107 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 MIR9-1-201ENST00000385198 89 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 MIR16-1-201ENST00000385271 89 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 U3.42-201ENST00000408746 214 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 MTCO2P1-201ENST00000424648 477 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 DUTP6-201ENST00000425573 462 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 DEFB130D-201ENST00000426866 237 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 OR51B8P-201ENST00000449892 769 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AC117522.3-201ENST00000507974 584 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 SNORA31.8-201ENST00000516327 108 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 RNU6-334P-201ENST00000517072 102 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 OR8K4P-201ENST00000534608 872 ntBASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC10Q9NYD6 AC079600.2-201ENST00000550076 130 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms