Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC093278.1-201ENST00000494700 600 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 SCARNA13-201ENST00000516672 275 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC106782.4-201ENST00000568264 210 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC091057.2-201ENST00000602594 792 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 MTATP6P2-201ENST00000603319 678 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC131902.3-201ENST00000611767 581 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AL138880.2-201ENST00000616214 239 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC006927.2-201ENST00000639256 389 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 GABRG2-229ENST00000641017 3628 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 RNA5SP374-201ENST00000362939 125 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 RNU5B-4P-201ENST00000363508 111 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 RNU6-1300P-201ENST00000391046 108 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AC063979.1-201ENST00000415539 377 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 RPL7P44-201ENST00000424827 742 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 OR2AS1P-201ENST00000427827 319 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AL671855.1-201ENST00000446875 1203 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AL590639.1-201ENST00000456484 337 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 RPL7P23-201ENST00000493874 747 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AC093801.2-201ENST00000503966 1050 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 GMPSP1-201ENST00000514075 579 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 MTCO3P27-201ENST00000514397 196 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 SETP7-201ENST00000552169 453 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AC122134.1-202ENST00000569111 1201 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 CKS1BP3-201ENST00000600888 237 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AC012443.1-201ENST00000605605 231 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AC084824.5-201ENST00000612009 413 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AL356585.4-201ENST00000623078 1229 ntBASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KLHL28Q9NXS3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AL353743.1-202ENST00000431724 1695 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 SNORA46-201ENST00000384762 135 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 SNORA48.5-201ENST00000391143 135 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AL357075.1-201ENST00000404107 726 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 LUZP4P1-201ENST00000415420 344 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 PSMA6P3-201ENST00000428242 164 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 Z75741.1-201ENST00000446793 314 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 VN1R10P-201ENST00000447106 875 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AL022099.1-201ENST00000604551 712 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AL133507.1-201ENST00000605269 557 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AC120053.1-201ENST00000607706 736 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AP001521.1-201ENST00000609150 300 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AL592148.2-201ENST00000612210 372 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AL157770.1-201ENST00000623049 439 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 AC087821.2-201ENST00000637086 450 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 MTND5P7-201ENST00000413558 1798 ntBASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.92□□□□□ -1.94
KLHL28Q9NXS3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC091564.4-201ENST00000533934 2194 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 RNU6-236P-201ENST00000363886 106 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 RNA5SP139-201ENST00000364340 117 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms