Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC107083.1-201ENST00000439643 279 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 AL592437.1-201ENST00000443781 492 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 ELOCP23-201ENST00000452014 332 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 RPL23AP78-201ENST00000599928 470 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 AL022099.1-201ENST00000604551 712 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 OR2B8P-201ENST00000432841 938 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AL096829.2-201ENST00000446582 742 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 RFC5P1-201ENST00000454419 874 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC092798.1-201ENST00000458542 409 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 RPL21P18-201ENST00000469899 480 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC069306.1-201ENST00000507006 843 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 RNU1-143P-201ENST00000516296 146 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 RNU6-885P-201ENST00000516607 104 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 MTND1P36-201ENST00000522384 936 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC010653.1-201ENST00000571108 881 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC092574.1-201ENST00000609771 420 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AP005229.2-201ENST00000609980 697 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 U1.23-201ENST00000610293 146 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 VN1R74P-201ENST00000613259 503 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC100793.4-201ENST00000613683 429 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 RNU1-68P-201ENST00000615382 146 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 U1.39-201ENST00000621562 146 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC099506.2-201ENST00000623074 221 ntBASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TM9SF3Q9HD45 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC099654.7-201ENST00000635788 2127 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 OR1S2-201ENST00000302592 978 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 RNU6-609P-201ENST00000365459 107 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 RPL21P3-201ENST00000395517 478 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 DEFB130D-201ENST00000426866 237 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AL158053.1-201ENST00000441503 453 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 MOB1AP2-201ENST00000446060 614 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AL359385.1-201ENST00000456509 365 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 RNU7-140P-201ENST00000459546 60 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC146507.2-201ENST00000460608 476 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 SETP11-201ENST00000473027 690 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC108860.1-201ENST00000484521 383 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 SCARNA20.6-201ENST00000517251 106 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC009812.2-201ENST00000517657 457 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AP003102.1-201ENST00000525638 661 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 OR7K1P-201ENST00000546439 926 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 MTCYBP27-201ENST00000555160 670 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 H3F3AP1-201ENST00000559984 334 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC093510.2-201ENST00000562820 896 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 MIR4789-201ENST00000577469 82 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 AC011260.1-201ENST00000578420 472 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms