Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC034268.2-201ENST00000571784 482 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 MIR5004-201ENST00000579078 107 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC245036.5-201ENST00000596330 847 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 MTATP6P2-201ENST00000603319 678 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC008759.3-201ENST00000613300 508 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AP000676.4-201ENST00000624659 623 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC006927.2-201ENST00000639256 389 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AL035425.3-201ENST00000564206 4996 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 MIR135A2-201ENST00000384854 100 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 SNRPEP2-201ENST00000397592 279 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 RPL7P27-201ENST00000403775 720 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 BTF3P8-201ENST00000414577 526 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 DPRXP1-201ENST00000426312 460 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 SEPT7P5-201ENST00000434048 306 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC024082.2-201ENST00000434771 238 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 SNRPGP6-201ENST00000451124 220 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 RPS29P12-201ENST00000460178 152 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC104164.3-201ENST00000467363 1258 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AL358832.1-201ENST00000497800 389 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC006445.2-201ENST00000510061 472 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC074250.1-201ENST00000511117 192 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC011260.1-201ENST00000578420 472 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC015688.2-201ENST00000584523 262 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AL592148.2-201ENST00000612210 372 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AL157770.1-201ENST00000623049 439 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 AL353743.1-202ENST00000431724 1695 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRRC40Q9H9A6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 MIR22-201ENST00000362190 85 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 RNU5B-4P-201ENST00000363508 111 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 MIR34B-201ENST00000385076 84 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 SNORA48.7-201ENST00000391302 135 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AL603865.2-201ENST00000401679 213 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 BEND7P1-201ENST00000422058 457 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC019178.2-201ENST00000423595 505 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC093155.1-201ENST00000440164 826 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AL592447.1-201ENST00000447592 540 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC017099.1-201ENST00000448261 1028 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 Z99496.1-201ENST00000469424 1477 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 RPL31P60-201ENST00000478450 367 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 RPL7P23-201ENST00000493874 747 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC026414.1-201ENST00000504046 698 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 MTND2P31-201ENST00000512602 616 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 RN7SKP272-201ENST00000516988 232 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AP003355.1-201ENST00000518956 587 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC104417.1-201ENST00000523974 751 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AP000867.2-201ENST00000532468 320 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC091564.4-201ENST00000533934 2194 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC009812.4-201ENST00000569134 1805 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 OR4K8P-201ENST00000578842 1048 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 MAGOH2P-202ENST00000584384 429 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AL445435.1-201ENST00000604232 665 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 AC026422.1-201ENST00000623961 452 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms