Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 FAM35DP-201ENST00000323387 2712 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 RNU6-157P-201ENST00000383957 107 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AL450338.1-201ENST00000407987 512 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC006989.1-201ENST00000427212 131 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 MTCO2P20-201ENST00000437339 673 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AL354941.1-201ENST00000438600 464 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC108938.1-201ENST00000451204 136 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 MTCO3P11-201ENST00000455103 774 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 MTCO3P44-201ENST00000510977 541 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 RNU4-60P-201ENST00000517239 135 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 DUXAP1-201ENST00000556632 463 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 MIR4637-201ENST00000582405 84 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC104763.2-201ENST00000604179 382 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC069304.2-201ENST00000605154 435 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC245297.2-201ENST00000610119 565 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AL450472.3-201ENST00000615578 367 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AC005183.1-201ENST00000603687 1979 ntBASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF541Q9H0D2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC027287.1-201ENST00000553115 1453 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AL079343.1-201ENST00000572358 1771 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC005005.2-201ENST00000420779 380 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AL357552.1-201ENST00000445254 415 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 RPL23AP35-201ENST00000451906 501 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 RPL18AP17-201ENST00000455326 198 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 RPS20P24-201ENST00000457473 361 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 PABPC1P3-201ENST00000469174 459 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC087312.1-201ENST00000471411 480 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 NARSP2-201ENST00000518524 679 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 ELOCP32-201ENST00000548625 324 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 VN1R79P-201ENST00000593540 513 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 VN1R90P-201ENST00000595717 726 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AL592221.1-201ENST00000605266 382 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 IGHVIII-44-202ENST00000636235 289 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 AL359693.1-201ENST00000614959 2407 ntBASIC3.85□□□□□ -1.79
ZNF541Q9H0D2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 AL359893.1-201ENST00000447628 1580 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 AC104454.1-201ENST00000421341 1401 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 AP002907.1-201ENST00000606361 1430 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 RNU6-263P-201ENST00000363811 107 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 SNORA71.1-201ENST00000364523 117 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 AF228730.1-201ENST00000397972 663 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 RN7SKP56-201ENST00000410513 331 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 OFD1P18Y-201ENST00000420889 959 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 AC012065.2-201ENST00000421295 375 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 AC092832.1-201ENST00000422934 400 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.84□□□□□ -1.79
ZNF541Q9H0D2 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms