Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC016769.3-201ENST00000396562 315 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AL603865.2-201ENST00000401679 213 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AL079342.2-201ENST00000403367 482 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 RNU2-15P-201ENST00000410692 191 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 RPL7P8-201ENST00000411964 730 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AL354692.1-201ENST00000423044 315 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC011242.1-201ENST00000433596 1158 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 CYCSP32-201ENST00000440548 321 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 MTCYBP42-201ENST00000444653 1130 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AL445669.2-201ENST00000454425 421 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 RPL27AP5-201ENST00000469428 449 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 RN7SL633P-201ENST00000488974 297 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC010460.2-201ENST00000509054 677 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 SNRPGP16-201ENST00000533275 226 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC087897.1-201ENST00000550134 156 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 GTF2IP8-201ENST00000560687 584 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 BNIP3P24-201ENST00000593398 557 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AL390838.2-201ENST00000602394 274 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AL133393.1-201ENST00000603277 287 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC097504.2-201ENST00000608088 454 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC024933.1-201ENST00000608472 348 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC091925.2-201ENST00000625059 256 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 AC126544.2-201ENST00000625174 749 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 Y_RNA.25-201ENST00000362528 102 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 RPS3AP26-201ENST00000398259 784 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 DPPA2P1-201ENST00000428060 556 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 TRIM60P18-201ENST00000441518 828 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 VN1R10P-201ENST00000447106 875 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC091179.1-201ENST00000461606 579 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AP001992.1-205ENST00000462248 379 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC117440.1-201ENST00000474107 571 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 POU5F1P7-201ENST00000508759 541 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC026412.2-201ENST00000512270 1075 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC008885.1-201ENST00000514930 301 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 RNU6-1028P-201ENST00000517164 93 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 RNU6-711P-201ENST00000517255 106 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AP001804.3-201ENST00000525146 880 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 PSMA2P1-201ENST00000526365 646 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 DEFB130C-202ENST00000530001 230 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AL391834.2-201ENST00000609982 546 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC009269.6-201ENST00000621778 588 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 MFSD8-245ENST00000641743 948 ntBASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCSER1Q9C0I3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 YPEL5P1-201ENST00000419731 367 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 AL137014.1-201ENST00000420490 1226 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 SEPT7P5-201ENST00000434048 306 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 MTCYBP11-201ENST00000447254 1109 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 RFC5P1-201ENST00000454419 874 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 AC092757.1-201ENST00000467293 467 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 AC108860.1-201ENST00000484521 383 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 RPL7P23-201ENST00000493874 747 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 AC069306.1-201ENST00000507006 843 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 AC119751.4-201ENST00000507498 357 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 TRAV37-201ENST00000553906 342 ntBASIC3.37□□□□□ -1.87
CCSER1Q9C0I3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms