Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MLECP1-201ENST00000615893 709 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AL359880.1-201ENST00000621879 266 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 ELF2P3-201ENST00000445099 1506 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 Y_RNA.1-201ENST00000352915 104 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 RNU4-1-201ENST00000363925 141 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 RNY3P13-201ENST00000365542 102 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 RNU6-1103P-201ENST00000384150 107 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 MIR513A2-201ENST00000385249 127 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 BTF3P7-201ENST00000407097 488 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 RPS7P15-201ENST00000415804 584 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC007283.2-201ENST00000424739 197 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 USP9YP18-201ENST00000425912 695 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 MTCO2P11-201ENST00000431069 680 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 MTATP6P30-201ENST00000443540 664 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 PHBP16-201ENST00000446318 950 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AL672167.3-201ENST00000465951 960 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 RN7SL810P-201ENST00000493031 276 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC023194.1-201ENST00000493084 308 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC109927.2-201ENST00000506416 303 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC026801.2-201ENST00000515352 425 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AP001893.2-201ENST00000526949 202 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 OR4K8P-201ENST00000578842 1048 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 BNIP3P33-201ENST00000598912 569 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AP001429.1-201ENST00000602568 530 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC113403.1-201ENST00000604910 193 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC006338.1-201ENST00000618453 749 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AC091905.1-201ENST00000624400 311 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 NOL8P1-201ENST00000508336 3529 ntBASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM54Q9BYV2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 MIR331-201ENST00000362302 94 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RNU6-181P-201ENST00000363225 107 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RNU6-1155P-201ENST00000363554 107 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RNA5SP505-201ENST00000364748 108 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RNU4-12P-201ENST00000365233 139 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RNU6-398P-201ENST00000384143 109 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 Y_RNA.554-201ENST00000384672 102 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 MIR585-201ENST00000384887 94 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL590002.1-201ENST00000406554 418 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL603766.1-201ENST00000407763 664 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AC099677.1-201ENST00000420575 175 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RPEP3-201ENST00000425462 676 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 MRPS10P2-201ENST00000431226 381 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL512326.1-201ENST00000443050 721 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RPL21P89-201ENST00000444021 467 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 H2AFZP6-201ENST00000444403 394 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AC132479.1-201ENST00000449160 144 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL645939.1-201ENST00000453429 797 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RPS29P22-201ENST00000472363 168 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RPS3AP14-201ENST00000483907 780 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RPL7P23-201ENST00000493874 747 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AC020893.1-201ENST00000502452 580 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms