Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC026979.1-201ENST00000492525 396 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 OR4G11P-201ENST00000492842 939 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 RPF2P2-201ENST00000504693 896 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 HMGN1P11-201ENST00000508668 303 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 TMEM248P1-201ENST00000510579 951 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC010486.3-201ENST00000511602 785 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC006499.2-201ENST00000513470 337 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 RN7SKP116-201ENST00000516902 319 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 MIR2116-201ENST00000517221 80 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 MTCO1P47-201ENST00000523889 1271 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC092470.1-201ENST00000546187 132 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 HSPE1P3-201ENST00000559254 309 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 HSPE1P5-201ENST00000561489 272 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 MIR4637-201ENST00000582405 84 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC078899.3-201ENST00000599065 212 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC006539.2-201ENST00000601729 572 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AL159169.3-201ENST00000608871 561 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AC243773.3-201ENST00000613270 256 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 DDX43P2-201ENST00000604753 1354 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC28BQ9BUN5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.21□□□□□ -1.89
CCDC28BQ9BUN5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.21□□□□□ -1.89
CCDC28BQ9BUN5 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC126755.2-208ENST00000327792 462 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC138969.1-213ENST00000331436 462 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 RNA5SP119-201ENST00000362715 117 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 RNA5SP197-201ENST00000363357 119 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 SNORD3H-201ENST00000384486 214 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 HMGB1P17-201ENST00000403495 628 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 PIGPP2-201ENST00000411569 458 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC011233.1-201ENST00000422812 283 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 TXNL1P1-201ENST00000429528 554 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 CYCSP4-201ENST00000429682 331 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 HIGD1AP11-201ENST00000438361 280 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 RPS15AP17-201ENST00000470598 390 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC093281.2-201ENST00000510153 597 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 MTCO1P35-201ENST00000515270 228 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 RNA5SP216-201ENST00000516111 123 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 RN7SKP244-201ENST00000516513 307 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 HSPA8P13-201ENST00000523715 472 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 DEFB131D-201ENST00000526803 184 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 OR8L1P-201ENST00000534005 955 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC005476.1-201ENST00000554427 397 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC090888.1-201ENST00000561335 1141 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AL157394.1-201ENST00000562983 1224 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 MTCO3P13-201ENST00000577757 781 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 VN1R90P-201ENST00000595717 726 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AL591516.1-201ENST00000611326 274 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 AC007671.2-201ENST00000637344 619 ntBASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC28BQ9BUN5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 GDI2P1-201ENST00000429312 1336 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 MTND5P24-201ENST00000438892 1767 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 OR4G11P-202ENST00000642116 1414 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 SNORA51.2-201ENST00000364595 132 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 SNORA26.7-201ENST00000391288 122 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 SNRPEP2-201ENST00000397592 279 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms