Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC005592.1-201ENST00000566527 1640 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AP001541.1-201ENST00000623322 1904 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC005522.1-201ENST00000395416 346 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 RNU2-3P-201ENST00000410144 191 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 RN7SKP126-201ENST00000411143 300 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AL158156.1-201ENST00000422509 473 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 UBE2D3P2-201ENST00000424409 445 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AL354707.3-201ENST00000427308 331 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 MTCYBP9-201ENST00000431021 303 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AL590128.1-201ENST00000433407 286 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 USP9YP7-201ENST00000436723 430 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 USP9YP32-201ENST00000452432 430 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC144530.1-201ENST00000452862 555 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 snoU13.24-201ENST00000458998 104 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 RN7SL216P-201ENST00000471607 298 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC092865.4-201ENST00000477936 615 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 RNU1-86P-201ENST00000516108 154 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 MIR892C-201ENST00000516410 77 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 RNU1-107P-201ENST00000516617 154 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 TOMM20P1-201ENST00000534518 427 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC140063.1-201ENST00000541343 259 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC091516.1-201ENST00000549191 703 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 RN7SL270P-201ENST00000579643 281 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 MIR3936-201ENST00000584304 110 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 7SK.7-201ENST00000603504 247 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC006328.2-201ENST00000623198 397 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC012005.2-201ENST00000624333 397 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 SNORA16A-202ENST00000628458 135 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 MIR1910-201ENST00000636955 80 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 AC119674.1-207ENST00000641355 633 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 PABPC1P6-201ENST00000445594 1829 ntBASIC5.06□□□□□ -1.6
CITED4Q96RK1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CITED4Q96RK1 ADAM5-202ENST00000399789 1942 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AL158163.1-201ENST00000603915 1649 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 Y_RNA.47-201ENST00000362697 108 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 RNA5SP232-201ENST00000364144 119 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 Y_RNA.245-201ENST00000364493 95 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 RNU1-55P-201ENST00000365510 158 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 MIR433-201ENST00000384837 93 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 AL590635.1-201ENST00000406314 586 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 RN7SKP86-201ENST00000410454 332 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 AL030996.1-201ENST00000411430 235 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 DPH3P2-201ENST00000422618 250 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AL356867.1-201ENST00000429623 299 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC234771.2-201ENST00000445718 597 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC245028.2-201ENST00000458673 253 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 AP000942.1-201ENST00000463969 747 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 RPL9P32-201ENST00000464118 620 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 RN7SL799P-201ENST00000475891 298 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 RN7SL57P-201ENST00000493687 290 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 SNX18P23-201ENST00000510867 677 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 MTCO2P24-201ENST00000515611 426 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 IGKV1D-22-201ENST00000518953 324 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms