Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.85□□□□□ -2.11
AP1S3Q96PC3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.85□□□□□ -2.11
AP1S3Q96PC3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.85□□□□□ -2.11
AP1S3Q96PC3 YPEL5P2-201ENST00000605553 359 ntBASIC1.85□□□□□ -2.11
AP1S3Q96PC3 AL731566.2-201ENST00000618971 317 ntBASIC1.85□□□□□ -2.11
AP1S3Q96PC3 AC244517.1-201ENST00000606030 2086 ntBASIC1.85□□□□□ -2.11
AP1S3Q96PC3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
AP1S3Q96PC3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
AP1S3Q96PC3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 SNORD114-30-201ENST00000364448 72 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 SNORA68.1-201ENST00000364537 132 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 MIR34B-201ENST00000385076 84 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 RNU4-74P-201ENST00000411280 161 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 USP9YP20-201ENST00000419224 558 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 AJ239321.1-201ENST00000424255 564 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 MTCO3P30-201ENST00000426425 670 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 YME1L1P1-201ENST00000429435 297 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 WARS2P1-201ENST00000429678 537 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 RPS24P13-201ENST00000442520 397 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 OR6K5P-201ENST00000447050 945 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 WASF1P1-201ENST00000447560 1131 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 FAM133DP-201ENST00000464802 691 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 RNA5SP282-201ENST00000516355 108 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 HMGB1P46-201ENST00000520062 610 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 AC022080.3-201ENST00000544433 482 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 MIR3609-201ENST00000582661 80 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 AC098657.3-201ENST00000620434 263 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 AL353748.2-201ENST00000622148 471 ntBASIC1.84□□□□□ -2.11
AP1S3Q96PC3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.84□□□□□ -2.11
AP1S3Q96PC3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.84□□□□□ -2.12
AP1S3Q96PC3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
AP1S3Q96PC3 CR848007.1-201ENST00000442354 1699 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 SNORA18.3-201ENST00000384122 132 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 RNU6-1226P-201ENST00000384317 107 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 SNORA51.11-201ENST00000384442 131 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 UBA52P6-201ENST00000399822 382 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 U3.37-201ENST00000408528 213 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 RNU6-712P-201ENST00000410558 100 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 RPS3AP9-201ENST00000417027 792 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 MRPS33P4-201ENST00000434892 317 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 RPL23AP15-201ENST00000450202 459 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC008280.2-201ENST00000455473 307 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 RNU7-26P-201ENST00000458980 63 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AL135752.1-201ENST00000479477 471 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC090255.1-201ENST00000495779 349 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC026427.2-201ENST00000506228 536 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 HIGD1AP13-201ENST00000509878 289 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 RNA5SP364-201ENST00000516938 78 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC018630.1-201ENST00000541376 925 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 MED28P6-201ENST00000558776 231 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 MIR3117-201ENST00000584034 78 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 DPRXP5-201ENST00000604662 539 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AL109618.2-201ENST00000605527 211 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 U4.3-201ENST00000621047 82 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 AC012640.5-201ENST00000623897 319 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.83□□□□□ -2.12
AP1S3Q96PC3 CKAP2P1-201ENST00000555477 2049 ntBASIC1.83□□□□□ -2.12
AP1S3Q96PC3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 SNORA41-201ENST00000384675 132 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 MIR524-201ENST00000385242 87 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 U3.20-201ENST00000390909 217 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 ATP5F1P3-201ENST00000397213 657 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 U3.40-201ENST00000408706 208 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms