Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RNA5SP52-201ENST00000362448 134 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 MIR9-3-201ENST00000385084 90 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 HMGN1P7-201ENST00000491722 313 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 HMGB1P1-201ENST00000522557 636 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 AC015911.5-201ENST00000587076 451 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 OR4G11P-202ENST00000642116 1414 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 RPL30P6-201ENST00000475925 342 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 AL109933.3-201ENST00000619095 188 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 MTND4P1-201ENST00000457501 1466 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 Y_RNA.204-201ENST00000364112 102 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 HMGB1P27-201ENST00000431429 603 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 RPS27P27-201ENST00000498779 255 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 PTP4A1P6-201ENST00000531034 478 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 AC245517.5-201ENST00000611529 162 ntBASIC0.91□□□□□ -2.26
SYNE2Q8WXH0 BX322784.1-201ENST00000455793 1077 ntBASIC0.9□□□□□ -2.26
SYNE2Q8WXH0 AC021205.2-201ENST00000480069 347 ntBASIC0.9□□□□□ -2.26
SYNE2Q8WXH0 AC104090.1-201ENST00000506341 1171 ntBASIC0.9□□□□□ -2.26
SYNE2Q8WXH0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.9□□□□□ -2.26
SYNE2Q8WXH0 WARS-244ENST00000627608 123 ntTSL 5 BASIC0.9□□□□□ -2.26
SYNE2Q8WXH0 AC009541.1-201ENST00000438279 2662 ntBASIC0.9□□□□□ -2.26
SYNE2Q8WXH0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
SYNE2Q8WXH0 RNY3P14-201ENST00000384309 102 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 RNU1-139P-201ENST00000391307 165 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 MIR1207-201ENST00000408249 87 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 HMGB3P11-201ENST00000440127 604 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 MIR98-201ENST00000606724 119 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 HMGB1P5-201ENST00000255320 642 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AL591416.1-201ENST00000404015 867 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AL354695.1-201ENST00000427935 228 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 HMGB3P6-201ENST00000444896 598 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AC105313.1-201ENST00000509121 353 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 XKRY-201ENST00000510392 1100 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 SCARNA1-201ENST00000517138 166 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 MIR4738-201ENST00000579134 87 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 MIR3936-201ENST00000584304 110 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 XPOTP1-201ENST00000443317 2398 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AP000873.1-201ENST00000463987 400 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AC092989.1-201ENST00000481235 277 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AF131216.2-201ENST00000512316 564 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 RNA5SP200-201ENST00000516360 103 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 MIR133A2-201ENST00000347538 102 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 Y_RNA.100-201ENST00000363141 102 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 RPL23AP39-201ENST00000415533 405 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AL358176.2-201ENST00000425769 204 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 AC107393.1-201ENST00000512403 346 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 MIR4635-201ENST00000583759 79 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 MTND5P11-201ENST00000511037 1812 ntBASIC0.9□□□□□ -2.27
SYNE2Q8WXH0 SEPT7P7-201ENST00000420492 1301 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 RNU1-22P-201ENST00000363334 158 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC245054.2-201ENST00000415639 319 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 OR6C64P-201ENST00000419708 825 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 CREM-238ENST00000488741 651 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 SYF2P1-201ENST00000550658 413 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC083806.3-201ENST00000614016 455 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms