Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AC092013.1-201ENST00000438795 332 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 MED6P1-201ENST00000439659 713 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 HSFY3P-201ENST00000444242 1191 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AL035407.2-201ENST00000454090 378 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 HMGN2P23-201ENST00000456759 269 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AC068587.2-201ENST00000478386 781 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 RNA5SP445-201ENST00000515889 115 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AC093510.2-201ENST00000562820 896 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AC023825.1-201ENST00000566704 1030 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AC090079.2-201ENST00000575289 768 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 PSMA6P4-201ENST00000603247 718 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AL645944.1-201ENST00000603857 493 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AL353997.5-201ENST00000618886 171 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AC083865.1-201ENST00000636634 831 ntBASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHROOM3Q8TF72 AP001486.2-201ENST00000561652 5113 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 ADAM3A-203ENST00000461344 2157 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 RNA5SP27-201ENST00000363839 119 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 U8.8-201ENST00000365399 135 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 RNU6-468P-201ENST00000384003 109 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 SNORA26.7-201ENST00000391288 122 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 SAR1AP2-201ENST00000392696 594 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AL592045.1-201ENST00000429867 352 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 RPS27AP9-201ENST00000477681 438 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC093801.2-201ENST00000503966 1050 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AP003355.1-201ENST00000518956 587 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC126365.2-201ENST00000580630 379 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 NF1P5-201ENST00000588287 448 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 ZNF92P3-201ENST00000596594 954 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC133794.1-201ENST00000602731 914 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AP002906.1-201ENST00000603405 233 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC123786.2-201ENST00000603459 275 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AP005229.2-201ENST00000609980 697 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC123768.4-201ENST00000616244 701 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 MIR6766-201ENST00000622641 72 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 MTND5P7-201ENST00000413558 1798 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC117529.2-201ENST00000512159 2068 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 AC005539.1-201ENST00000443768 1479 ntBASIC2.46□□□□□ -2.02
SHROOM3Q8TF72 RNU1-51P-201ENST00000365345 176 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MIR7-2-201ENST00000384970 110 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MIR1303-201ENST00000408625 86 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC092745.2-202ENST00000411880 369 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC010385.1-201ENST00000412374 256 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MTCO2P17-201ENST00000424336 677 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 RPS7P2-201ENST00000435134 607 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 RPL7P29-201ENST00000437151 728 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC112673.1-201ENST00000513168 575 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC112206.4-201ENST00000515142 405 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 RNU6-1004P-201ENST00000516584 111 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 HMGB1P1-201ENST00000522557 636 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 RANP3-201ENST00000530970 276 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC008083.2-201ENST00000546707 476 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MAGOH2P-202ENST00000584384 429 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 ABI1P1-201ENST00000603375 1120 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC025811.1-201ENST00000604312 472 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms