Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-858P-201ENST00000362436 107 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RNU1-85P-201ENST00000364127 164 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-1078P-201ENST00000364522 103 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-215P-201ENST00000365169 102 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-434P-201ENST00000384376 107 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-393P-201ENST00000384475 107 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AL080315.1-201ENST00000406055 466 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-394P-201ENST00000410735 107 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 PSMA2P3-201ENST00000429685 675 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RAC1P7-201ENST00000445367 377 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AC009220.1-201ENST00000451614 275 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RPL36AP13-201ENST00000457490 317 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RPL7AP10-201ENST00000481016 791 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AP001086.1-201ENST00000494882 321 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 MIR4643-201ENST00000577473 78 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AP005403.1-201ENST00000579720 229 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 MIR4697-201ENST00000582977 78 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AC012616.1-201ENST00000600294 197 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AC000068.2-201ENST00000608816 460 ntBASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AC087516.1-201ENST00000561236 2428 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 RPL23P2-201ENST00000320371 421 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 RNU1-76P-201ENST00000362903 159 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 MIR517A-201ENST00000385001 87 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AC016397.1-201ENST00000412463 242 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 UBE2V1P4-201ENST00000425374 344 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AC084198.1-201ENST00000477747 402 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 RPL7P23-201ENST00000493874 747 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 RPS27P26-201ENST00000494583 239 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 LSM6P2-201ENST00000552208 177 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 OR1F2P-201ENST00000570470 933 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 MIR4420-201ENST00000583944 77 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 PSMA6P4-201ENST00000603247 718 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AC083899.1-201ENST00000454465 3819 ntBASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NKX2-3Q8TAU0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
NKX2-3Q8TAU0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AL033543.1-201ENST00000623440 13454 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 SNORD115-46-201ENST00000390982 71 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AL009179.1-201ENST00000406085 265 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 SNORA11-201ENST00000408789 128 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 SYF2P2-201ENST00000417620 583 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 RPL23AP25-201ENST00000430973 463 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AL353997.1-201ENST00000432936 108 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 CEACAMP9-201ENST00000442990 513 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 TPT1P13-201ENST00000449760 499 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 SEPT14P8-201ENST00000508026 178 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms