Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC005798.1-201ENST00000513715 387 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AP003730.1-201ENST00000524605 285 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 RPS3AP4-201ENST00000555161 764 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AP003117.2-201ENST00000606010 545 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 MIR6748-201ENST00000610433 71 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC091304.9-201ENST00000612091 226 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 U6.42-201ENST00000618440 107 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AL445567.2-201ENST00000618935 498 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AL445264.1-201ENST00000621719 171 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AP006248.2-201ENST00000623309 592 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC124864.2-201ENST00000624736 186 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AL157786.1-207ENST00000627771 695 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 CYP3A51P-201ENST00000633513 256 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC244258.1-201ENST00000637553 1071 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 AC099654.13-201ENST00000639774 207 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP4Q8N3C7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 SNORA60-201ENST00000362396 134 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 SNORD115.1-201ENST00000391109 76 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 SSXP10-201ENST00000402595 565 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC009237.5-201ENST00000414271 501 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 SPA17P1-201ENST00000416656 452 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AL159169.1-201ENST00000421119 127 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 MTCO2P5-201ENST00000422621 426 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 GLRXP1-201ENST00000423261 334 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 PLGLA-201ENST00000465668 449 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 PABPC1P3-201ENST00000469174 459 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC104563.1-201ENST00000476147 376 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC002456.2-201ENST00000509356 380 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 RNU6-1003P-201ENST00000517099 105 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 RN7SKP234-201ENST00000517173 224 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AP003467.2-201ENST00000520175 319 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AL157394.1-201ENST00000562983 1224 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC099489.2-201ENST00000574976 260 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 MIR4458-201ENST00000578872 75 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 YWHAQP7-201ENST00000603536 658 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC020910.2-201ENST00000603635 610 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC007014.2-201ENST00000615581 479 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 AC068880.5-201ENST00000624331 290 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 CCT4P2-201ENST00000233836 1548 ntBASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CLIP4Q8N3C7 FARSBP1-201ENST00000435808 1778 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 RNU4-12P-201ENST00000365233 139 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 RNU6-744P-201ENST00000365557 107 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 RNU6-1316P-201ENST00000384242 108 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 SNORD115-47-201ENST00000391226 86 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 HMGN2P8-201ENST00000391458 268 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 RPS20P2-201ENST00000402520 389 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 MIR1251-201ENST00000408552 70 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms