Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC244517.1-201ENST00000606030 2086 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 RNA5SP124-201ENST00000362739 110 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 RNU6-533P-201ENST00000384144 107 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 RNU6-809P-201ENST00000384461 107 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 MIR670-201ENST00000390142 98 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AMD1P2-201ENST00000412936 992 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 RPL21P32-201ENST00000419877 477 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AC006366.1-201ENST00000422002 759 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 RPS6P12-201ENST00000432491 726 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 USP9YP29-201ENST00000445112 563 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AL133547.1-201ENST00000448546 220 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 USP9YP12-201ENST00000450481 570 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 NDUFS5P3-201ENST00000450668 321 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 RPL21P11-201ENST00000461458 483 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AC021382.1-201ENST00000483523 359 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AC112204.1-201ENST00000502591 103 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 IGKV2-38-201ENST00000517443 247 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AC005771.1-201ENST00000585581 349 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AC128687.2-201ENST00000609657 566 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AC005344.1-201ENST00000613391 459 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AL121772.2-201ENST00000614331 297 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 AC018755.4-201ENST00000619715 454 ntBASIC3.61□□□□□ -1.83
BEST3Q8N1M1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 PNPT1P2-201ENST00000456768 2050 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AL133412.1-201ENST00000380194 2992 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 SNORD116-4-201ENST00000384733 96 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AL583834.1-201ENST00000406943 343 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 Y_RNA.598-201ENST00000410480 95 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC092447.6-201ENST00000414578 210 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AL356583.2-201ENST00000426536 280 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 GOT2P5-201ENST00000433995 546 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 MTND4LP10-201ENST00000435146 291 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 UBE2V1P13-201ENST00000436983 439 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 RANP8-201ENST00000444720 713 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AL590365.1-201ENST00000450788 243 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 RPS20P32-201ENST00000456044 356 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AP1S2P1-201ENST00000457344 379 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 ACTR3P3-201ENST00000480448 893 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC022447.1-201ENST00000515358 464 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 RNA5SP143-201ENST00000516936 115 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC087369.1-201ENST00000520775 996 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AP002963.1-201ENST00000530590 184 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC022878.1-201ENST00000530684 149 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC135001.1-201ENST00000544546 283 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC034268.2-201ENST00000571784 482 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC087499.8-201ENST00000578406 226 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 MIR3611-201ENST00000584484 83 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 HMGN2P28-201ENST00000606102 262 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 OR6R2P-201ENST00000609216 300 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC010678.1-201ENST00000614118 713 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AL590099.1-201ENST00000615276 138 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC004825.2-201ENST00000616634 455 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AC108479.2-201ENST00000617314 601 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 AL356585.4-201ENST00000623078 1229 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms