Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 RNA5SP139-201ENST00000364340 117 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 TATDN1P1-201ENST00000414123 891 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 PNRC2P1-201ENST00000423940 420 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AL135938.1-201ENST00000443141 297 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC027673.1-201ENST00000456245 405 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC011825.1-201ENST00000484967 388 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC008885.2-201ENST00000509506 930 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC027338.1-201ENST00000514840 825 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 MTND2P7-201ENST00000521337 640 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 CKS1BP7-201ENST00000522230 235 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AP001804.3-201ENST00000525146 880 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AP003385.6-201ENST00000531603 374 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AL391156.1-201ENST00000554965 554 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC087481.2-201ENST00000565492 330 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 RPL23AP78-201ENST00000599928 470 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 RPL12P50-201ENST00000603116 116 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC018618.2-201ENST00000604770 446 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 RNA5SP393-201ENST00000363423 117 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 RNU6-481P-201ENST00000384194 107 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 SNORA44-201ENST00000384584 132 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 MIR9-1-201ENST00000385198 89 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 RPS4XP3-201ENST00000398541 413 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 SFR1P1-201ENST00000403720 688 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 RNA5SP56-201ENST00000410277 118 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 RNU2-25P-201ENST00000411041 191 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC096664.2-201ENST00000411843 406 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AL158050.1-201ENST00000416077 457 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 USP9YP20-201ENST00000419224 558 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 OFD1P18Y-201ENST00000420889 959 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC073310.1-201ENST00000423226 1033 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 RPS24P13-201ENST00000442520 397 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC233982.1-201ENST00000451247 436 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC113192.3-201ENST00000529152 742 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AL136520.1-202ENST00000555494 763 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AL669831.4-202ENST00000590817 238 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC098483.2-201ENST00000603158 454 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AP001330.4-201ENST00000604350 154 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AC005000.2-201ENST00000605468 310 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 AL121594.5-201ENST00000631724 573 ntBASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMARCD3Q6STE5 CUL1P1-201ENST00000509510 2425 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 ZNF833P-201ENST00000424938 1494 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 MIR128-1-201ENST00000384921 82 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 RPLP0P7-201ENST00000416050 667 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AP000949.1-201ENST00000438328 629 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 RPS12P2-201ENST00000439728 269 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC068135.1-201ENST00000446164 246 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AL590664.1-201ENST00000448065 339 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC008280.2-201ENST00000455473 307 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC078857.1-201ENST00000469870 667 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 NAMPTP2-201ENST00000505629 1115 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC008628.1-201ENST00000508663 265 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC010625.1-201ENST00000511296 403 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms